RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SDK2Q58EX2 2172 aa21.79■■□□□ 1.08
PTCHD3P2-201ENST00000424937 FAM237BA0A1B0GVD1 139 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 EFCAB7A8K855 629 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 PRMT5O14744 637 aaPredicted RBP21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 PRAMEF10O60809 474 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 NDUFS3O75489 264 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 C9P02748 559 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 NDUFS1P28331 727 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ABCG1P45844 678 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 LEPRP48357 1165 aaKnown RBP21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ETF1P62495 437 aaKnown RBP21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 DHX34Q14147 1143 aaKnown RBP21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 MRNIPQ6NTE8 343 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 IRGCQ6NXR0 463 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 C19orf48Q6RUI8 117 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 SYT10Q6XYQ8 523 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 SYDE1Q6ZW31 735 aaPredicted RBP21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ARHGAP22Q7Z5H3 698 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 LKAAEAR1Q8TD35 194 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 KCNE4Q8WWG9 221 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 USP7Q93009 1102 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 C9orf72Q96LT7 481 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 TRIM51Q9BSJ1 452 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 TSSK1BQ9BXA7 367 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 OCIAD1Q9NX40 245 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 IL1RAPL1Q9NZN1 696 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 MAD1L1Q9Y6D9 718 aa21.78■■□□□ 1.08
PTCHD3P2-201ENST00000424937 AHCTF1Q8WYP5 2266 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 UBA6A0AVT1 1052 aaPredicted RBP21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 IQCF5A8MTL0 148 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 TTI1O43156 1089 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 FGF3P11487 239 aaPredicted RBP21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ITPKBP27987 946 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 CSE1LP55060 971 aaKnown RBP21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ANKRD20A4Q4UJ75 823 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 PTRHD1Q6GMV3 140 aaKnown RBP21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 KLHL35Q6PF15 583 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 FAM92BQ6ZTR7 304 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 PCGF5Q86SE9 256 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 HOOK3Q86VS8 718 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 AGGF1Q8N302 714 aaeCLIP21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ZFPM2Q8WW38 1151 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 ART4Q93070 314 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 FERD3LQ96RJ6 166 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 FOXJ2Q9P0K8 574 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 GNPTGQ9UJJ9 305 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 RPS6KL1Q9Y6S9 549 aa21.77■■□□□ 1.08
PTCHD3P2-201ENST00000424937 DSPP15924 2871 aaKnown RBP21.77■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SLC5A10A0PJK1 596 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 MAGEB16A2A368 324 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 C9orf172C9J069 976 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 NVLO15381 856 aaKnown RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 RASSF9O75901 435 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 ARCN1P48444 511 aaKnown RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 CD151P48509 253 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 EIF3BP55884 814 aaKnown RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 PPP1CAP62136 330 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TMEM164Q5U3C3 297 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SDCCAG8Q86SQ7 713 aaPredicted RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 OOSP2Q86WS3 158 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SPACA3Q8IXA5 215 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 KRT222Q8N1A0 295 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TFGQ92734 400 aaPredicted RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 ZDHHC12Q96GR4 267 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 FCRL3Q96P31 734 aaPredicted RBP21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 KRT12Q99456 494 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 HGH1Q9BTY7 390 aa21.76■■□□□ 1.07
PTCHD3P2-201ENST00000424937 ANKRD34CP0C6C1 535 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 OGNP20774 298 aaKnown RBP21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 CCR7P32248 378 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SEPHS1P49903 392 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TYSND1Q2T9J0 566 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 COL28A1Q2UY09 1125 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 RNF187Q5TA31 235 aaPredicted RBP21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 PHC3Q8NDX5 983 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 ACVR1CQ8NER5 493 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 PMEPA1Q969W9 287 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 STAMBPL1Q96FJ0 436 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SIGLEC10Q96LC7 697 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TAAR9Q96RI9 348 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 CARD6Q9BX69 1037 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 P2RY12Q9H244 342 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 SLC39A1Q9NY26 324 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 EPHA6Q9UF33 1036 aa21.75■■□□□ 1.07
PTCHD3P2-201ENST00000424937 ZCWPW2A0A1B0GU75 182 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 OR6C74A6NCV1 312 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 OR5K3A6NET4 321 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 B4E171 279 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 PFDN6O15212 129 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 KLK10O43240 276 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 KIF1CO43896 1103 aaKnown RBP21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 BANF1O75531 89 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 USP1O94782 785 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 RPS3P23396 243 aaKnown RBP eCLIP21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 IVDP26440 423 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TSPAN7P41732 249 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 PLOD1Q02809 727 aaPredicted RBP21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 HSPA14Q0VDF9 509 aa21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 THOC5Q13769 683 aaKnown RBP21.74■■□□□ 1.07
PTCHD3P2-201ENST00000424937 TMED2Q15363 201 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms