RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 OSGIN1Q9UJX0 560 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FNDC3AQ9Y2H6 1198 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 PCDHGB6Q9Y5F9 930 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SCN1AP35498 2009 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 POLR1CO15160 346 aaPredicted RBP11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 MTSS1O43312 755 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 RAP2AP10114 183 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PTPRAP18433 802 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 IMPDH1P20839 514 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 AGTR2P50052 363 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 TPI1P60174 286 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PHYKPLQ8IUZ5 450 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 EDEM1Q92611 657 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 VNN3Q9NY84 501 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 TAS2R16Q9NYV7 291 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF112Q9UJU3 913 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 KCTD3Q9Y597 815 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 SMIM30A4D0T7 59 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 LOC110117498-PIK3R3F6TDL0 507 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 M0R129 80 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 DFNA5O60443 496 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 APOA1P02647 267 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PGRP06401 933 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PRSS56P0CW18 603 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 GLULP15104 373 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 OR3A3P47888 321 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 POLR2JP52435 117 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 FCGRTP55899 365 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 PSMD5Q16401 504 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 CCNJQ5T5M9 372 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 GRPEL2Q8TAA5 225 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.12□□□□□ -0.633e-14■■■■□ 24.3
SEC61A1-202ENST00000424880 UBXN10Q96LJ8 280 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 TRNT1Q96Q11 434 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 CDADC1Q9BWV3 514 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 ABCG8Q9H221 673 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 KAT8Q9H7Z6 458 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 ACTR8Q9H981 624 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 UBA2Q9UBT2 640 aaPredicted RBP11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 GABRQQ9UN88 632 aa11.12□□□□□ -0.63
SEC61A1-202ENST00000424880 OR6C70A6NIJ9 312 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 BBIP1A8MTZ0 92 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC22A3O75751 556 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PTTG1O95997 202 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 GBX1Q14549 363 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PCID2Q5JVF3 399 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF691Q5VV52 312 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 OR2T11Q8NH01 316 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PEX13Q92968 403 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC47A1Q96FL8 570 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 VAT1Q99536 393 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TIGARQ9NQ88 270 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 POLR3BQ9NW08 1133 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 STMN3Q9NZ72 180 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 BTBD3Q9Y2F9 522 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 KLHL20Q9Y2M5 609 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 C1QCP02747 245 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 CYP2C8P10632 490 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 RRM2P31350 389 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 SERPINH1P50454 418 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 BACE1P56817 501 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 DNAJB13P59910 316 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 MAXP61244 160 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TMEM132DQ14C87 1099 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 OR4D1Q15615 310 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ATP6AP1LQ52LC2 224 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 HECTD2Q5U5R9 776 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PRMT9Q6P2P2 845 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 GLCCI1Q86VQ1 547 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TOR1AIP2Q8NFQ8 470 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TRIM54Q9BYV2 358 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 VAPAQ9P0L0 249 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 B3GALT4O96024 378 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PIRTP0C851 137 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 HOXD8P13378 290 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 TGFBR2P37173 567 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 DCTP40126 519 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 NPY2RP49146 381 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 OTUD1Q5VV17 481 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF544Q6NX49 715 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF517Q6ZMY9 492 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 UBQLNLQ8IYU4 475 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 PAPD5Q8NDF8 572 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM162AQ96A26 154 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms