RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PTPN6P29350 595 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 NTSR1P30989 418 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GJC1P36383 396 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 IGHMBP2P38935 993 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PXNP49023 591 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 STARP49675 285 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CLK3P49761 638 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MTHFSP49914 203 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SERPINH1P50454 418 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SRP54P61011 504 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 NUCB2P80303 420 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TIAL1Q01085 375 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GALK2Q01415 458 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GUCY1B3Q02153 619 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ACSM1Q08AH1 577 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SEMA3BQ13214 749 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ALKBH1Q13686 389 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CCNIQ14094 377 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 IL18Q14116 193 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PDK3Q15120 406 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC18A3Q16572 532 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 DECR1Q16698 335 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 FAM187BQ17R55 369 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 BMT2Q1RMZ1 405 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GXYLT1Q4G148 440 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 IQCCQ4KMZ1 466 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SOWAHCQ53LP3 525 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM41BQ5BJD5 291 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PLAC9Q5JTB6 97 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SH2D4BQ5SQS7 431 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 C17orf99Q6UX52 265 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PHLDB2Q86SQ0 1253 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 RTN4RL2Q86UN3 420 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF280BQ86YH2 543 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 RASAL3Q86YV0 1011 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CD302Q8IX05 232 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CENPLQ8N0S6 344 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC43A2Q8N370 569 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TCAIMQ8N3R3 496 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CPXM2Q8N436 756 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 RASGEF1AQ8N9B8 481 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 FADS6Q8N9I5 356 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC17A8Q8NDX2 589 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CPEB3Q8NE35 698 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TRIM58Q8NG06 486 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 OR56B1Q8NGI3 324 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC20A1Q8WUM9 679 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SELENOMQ8WWX9 145 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 RLN3Q8WXF3 142 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 NPIPB3Q92617 1050 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 NT5C3BQ969T7 300 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SPSB1Q96BD6 273 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 BSCL2Q96G97 398 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 KLHL5Q96PQ7 755 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 JPH2Q9BR39 696 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 UQCC2Q9BRT2 126 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 FAM213AQ9BRX8 229 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MRI1Q9BV20 369 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ABHD6Q9BV23 337 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CDK19Q9BWU1 502 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 NUAK2Q9H093 628 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TRPV6Q9H1D0 765 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 UBQLN3Q9H347 655 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 RIOX1Q9H6W3 641 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MINDY3Q9H8M7 445 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SRD5A3Q9H8P0 318 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GLOD4Q9HC38 313 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PANK4Q9NVE7 773 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 BABAM1Q9NWV8 329 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 UBQLN2Q9UHD9 624 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 STEAP1Q9UHE8 339 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC23A1Q9UHI7 598 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SLC45A2Q9UMX9 530 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 AAR2Q9Y312 384 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SPATA31A3Q5VYP0 1347 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MYO3BQ8WXR4 1341 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 A0A1W2PR77 199 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 GSAPA4D1B5 854 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 UNC119BA6NIH7 251 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DRGXA6NNA5 263 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 MARCH11A6NNE9 402 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 RSPH10B2B2RC85 870 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 K7EQM0 130 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 LGALS8O00214 317 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF213O14771 459 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 HS3ST1O14792 307 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 DCLK1O15075 740 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PJA2O43164 708 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 PLRG1O43660 514 aaKnown RBP3.64□□□□□ -1.83
SF3B1-205ENST00000424674 CDKL5O76039 1030 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 GLCEO94923 617 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 KAT7O95251 611 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 OR52Z1P0C646 297 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 UQCRFS1P1P0C7P4 283 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 RSPH10BP0C881 870 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 EBLN1P0CF75 366 aa3.64□□□□□ -1.83
SF3B1-205ENST00000424674 TCF4P15884 667 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms