RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PCSK7Q16549 785 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 DUS1LQ6P1R4 473 aaKnown RBP16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 OR4E2Q8NGC2 313 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 SLC7A5P2Q9GIP4 190 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 TRABDQ9H4I3 376 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A7Q9HAW7 530 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A10Q9HAW8 530 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A8Q9HAW9 530 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 P4HTMQ9NXG6 502 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 LDB2O43679 373 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 ZG16O60844 167 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 MT-CYBP00156 380 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 ST6GAL1P15907 406 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 HLA-DPA1P20036 260 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 NDUFS1P28331 727 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 FAM182AQ5T1J6 154 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 SPDYE1Q8NFV5 336 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 OR2L2Q8NH16 312 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 AGAP3Q96P47 875 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 RNF157Q96PX1 679 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 ATP13A2Q9NQ11 1180 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 IL17CQ9P0M4 197 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 CELSR1Q9NYQ6 3014 aa16.23■□□□□ 0.19
CHCHD3-202ENST00000423635 PRSS44E7EML9 344 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 MAP3K7O43318 606 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 STSP08842 583 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 SPAM1P38567 509 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 LONRF2Q1L5Z9 754 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 GPRC6AQ5T6X5 926 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 MLIPQ5VWP3 458 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 IGFL2Q6UWQ7 119 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 B4GALNT4Q76KP1 1039 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 PLD5Q8N7P1 536 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 ACVR1CQ8NER5 493 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 SPATA22Q8NHS9 363 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 PPP4R1Q8TF05 950 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 FAR1Q8WVX9 515 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 PTERQ96BW5 349 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 TRAPPC9Q96Q05 1148 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 WDR77Q9BQA1 342 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 CEP41Q9BYV8 373 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 SMOXQ9NWM0 555 aa16.22■□□□□ 0.19
CHCHD3-202ENST00000423635 A0A1B0GUH1 482 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 LOC285095A0A1B0GVY8 99 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 H3BMH7 237 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 GAPDHSO14556 408 aaPredicted RBP16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 GPR39O43194 453 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 CBSLP0DN79 551 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 PYGMP11217 842 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 CBSP35520 551 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 FOLR3P41439 243 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 TSFMP43897 325 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 LMAN1P49257 510 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 AP1B1Q10567 949 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 ITGA9Q13797 1035 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 PPP2R5EQ16537 467 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 CPNE8Q86YQ8 564 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 OR2Y1Q8NGV0 311 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 GRHL3Q8TE85 626 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 NACC2Q96BF6 587 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 LINC00615Q96LM1 132 aaPredicted RBP16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 GLOD4Q9HC38 313 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 NOVA2Q9UNW9 492 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 PTRH2Q9Y3E5 179 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 HEBP2Q9Y5Z4 205 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 AP1M2Q9Y6Q5 423 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 ZGRF1Q86YA3 2104 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 CCDC88CQ9P219 2028 aa16.21■□□□□ 0.19
CHCHD3-202ENST00000423635 GLYATL1P3A0A0U1RQE8 302 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 A0A1W2PQJ5 194 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 BTN3A3O00478 584 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 EPOP01588 193 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC35G4P0C7Q5 338 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 KDELR1P24390 212 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 PBLDP30039 288 aaPredicted RBP16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 GJC1P36383 396 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 TAS2R40P59535 323 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 ART3Q13508 389 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 GSE1Q14687 1217 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 ZXDCQ2QGD7 858 aaPredicted RBP16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 TEX44Q53QW1 395 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 RHBDD2Q6NTF9 364 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 MRPL14Q6P1L8 145 aaKnown RBP16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 FAM151BQ6UXP7 276 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 CDHR3Q6ZTQ4 885 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 PPP1R32Q7Z5V6 425 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 ZC3H18Q86VM9 953 aaKnown RBP16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 RMDN2Q96LZ7 410 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 GBP5Q96PP8 586 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 CCM2Q9BSQ5 444 aa16.2■□□□□ 0.18
CHCHD3-202ENST00000423635 SRMSQ9H3Y6 488 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms