RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NSMAFQ92636 917 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 PTPRN2Q92932 1015 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TNFRSF25Q93038 417 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TADA1Q96BN2 335 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZG16BQ96DA0 208 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TSPAN17Q96FV3 270 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CEP295NLQ96MC4 621 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 C12orf66Q96MD2 445 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 LPIN3Q9BQK8 851 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 MS4A7Q9GZW8 240 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZBP1Q9H171 429 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 POT1Q9NUX5 634 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CUEDC1Q9NWM3 386 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 WWOXQ9NZC7 414 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 MTRRQ9UBK8 725 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TRMT6Q9UJA5 497 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 FBXW11Q9UKB1 542 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 HIDE1A8MVS5 230 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 WWP2O00308 870 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TIMM23O14925 209 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 FGF10O15520 208 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 B3GALT2O43825 422 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 HSPA4LO95757 839 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 IFNB1P01574 187 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 COL2A1P02458 1487 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 EEF1GP26641 437 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CBX5P45973 191 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ALDH9A1P49189 494 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CCR5P51681 352 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ETF1P62495 437 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 MYL5Q02045 173 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SPECC1LQ69YQ0 1117 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TCEAL6Q6IPX3 200 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 BEND4Q6ZU67 534 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMTC3Q6ZXV5 915 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 LRRTM4Q86VH4 590 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SPATA24Q86W54 205 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 STK40Q8N2I9 435 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM105Q8N8V8 129 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 C7orf43Q8WVR3 580 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 EZH1Q92800 747 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SELENOSQ9BQE4 189 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM79Q9BSE2 394 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ESYT1Q9BSJ8 1104 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SLC17A9Q9BYT1 436 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TM6SF2Q9BZW4 377 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZYG11BQ9C0D3 744 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 KLC2Q9H0B6 622 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM134Q9H6X4 195 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 NHEJ1Q9H9Q4 299 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SEPSECSQ9HD40 501 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 OXSMQ9NWU1 459 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 HRASLS2Q9NWW9 162 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 KLHL28Q9NXS3 571 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 BFARQ9NZS9 450 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 RAB21Q9UL25 225 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 RIMKLBQ9ULI2 386 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ATP23Q9Y6H3 246 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TNS1Q9HBL0 1735 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 NID2Q14112 1375 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 WNT9AO14904 365 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 EREGO14944 169 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZSCAN12O43309 604 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 LRIG2O94898 1065 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CDK14O94921 469 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 KRT7P08729 469 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 KRT16P08779 473 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM253P0C7T8 217 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CLUP10909 449 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 HAPLN1P10915 354 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 FCGR2AP12318 317 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 NPPBP16860 134 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TPSB2P20231 275 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CALB2P22676 271 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 GDF1P27539 372 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 GGCXP38435 758 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 PTENP60484 403 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SRYQ05066 204 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TPSAB1Q15661 275 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 INAQ16352 499 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 UBXN11Q5T124 520 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 MRNIPQ6NTE8 343 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 PAGE2Q7Z2X7 111 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CAMKMTQ7Z624 323 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 AGGF1Q8N302 714 aaeCLIP3.49□□□□□ -1.855e-10■□□□□ 11.2
TOP2A-201ENST00000423485 SVOPQ8N4V2 548 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 SLC25A41Q8N5S1 370 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 GALNT11Q8NCW6 608 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF417Q8TAU3 575 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 BLOC1S5Q8TDH9 187 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 RAD51AP1Q96B01 352 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CHFRQ96EP1 664 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 EPSTI1Q96J88 318 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 CLPTM1LQ96KA5 538 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF587Q96SQ5 575 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 WDR77Q9BQA1 342 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 DDX4Q9NQI0 724 aaKnown RBP3.49□□□□□ -1.85
TOP2A-201ENST00000423485 PPP1R14DQ9NXH3 145 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 GMIPQ9P107 970 aa3.49□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM59LQ9UK28 342 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms