RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CFAP99D6REC4 459 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 MATN2O00339 956 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CRTAMO95727 393 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 POLBP06746 335 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 KLK3P07288 261 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-205ENST00000423214 POLR2CP19387 275 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-205ENST00000423214 ITGALP20701 1170 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 PSMB4P28070 264 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 PGDP52209 483 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 GSDMDP57764 484 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CHAF1BQ13112 559 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CPZQ66K79 652 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CPT1BQ92523 772 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 ZNF501Q96CX3 271 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CLIP3Q96DZ5 547 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 CCM2Q9BSQ5 444 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 SLC25A23Q9BV35 468 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 TLR10Q9BXR5 811 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 TRIM55Q9BYV6 548 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 C10orf88Q9H8K7 445 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 VPS37BQ9H9H4 285 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 LATS2Q9NRM7 1088 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 BTRCQ9Y297 605 aa15.73■□□□□ 0.11
COL18A1-205ENST00000423214 AAR2Q9Y312 384 aaKnown RBP15.73■□□□□ 0.11
COL18A1-205ENST00000423214 PCM1Q15154 2024 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 ICE1Q9Y2F5 2266 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 ARGFXA6NJG6 315 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 LCA5LO95447 670 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 HADHAP40939 763 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 CD97P48960 835 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 PRLHRP49683 370 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 COPS2P61201 443 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 OTUD4Q01804 1114 aaKnown RBP15.72■□□□□ 0.11
COL18A1-205ENST00000423214 GPS2Q13227 327 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 IL10RAQ13651 578 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 SPA17Q15506 151 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 CFAP206Q8IYR0 622 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 ACVR1CQ8NER5 493 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 KRT35Q92764 455 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 MRFAP1L1Q96HT8 127 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 LINC00615Q96LM1 132 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-205ENST00000423214 PPP1R2P1Q96PQ5 205 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 COPS8Q99627 209 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 GORASP1Q9BQQ3 440 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 SLC7A5P2Q9GIP4 190 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 AKIRIN1Q9H9L7 192 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-205ENST00000423214 POMT2Q9UKY4 750 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 G3BP2Q9UN86 482 aaKnown RBP15.72■□□□□ 0.11
COL18A1-205ENST00000423214 SNX7Q9UNH6 387 aa15.72■□□□□ 0.11
COL18A1-205ENST00000423214 FARSAQ9Y285 508 aaKnown RBP15.72■□□□□ 0.11
COL18A1-205ENST00000423214 CLEC18AA5D8T8 446 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 SOWAHDA6NJG2 315 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 TTLL8A6PVC2 850 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 IFRD1O00458 451 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-205ENST00000423214 KCNN4O15554 427 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 MAP3K7O43318 606 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 VPS4BO75351 444 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 PDGFAP04085 211 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 GP1BBP13224 206 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CYP2A7P20853 494 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-205ENST00000423214 TMPRSS15P98073 1019 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 OLIG2Q13516 323 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ANKRD20A2Q5SQ80 823 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ANKRD20A1Q5TYW2 823 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ANKRD20A3Q5VUR7 823 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 IZUMO3Q5VZ72 239 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ZNF449Q6P9G9 518 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 FBXO38Q6PIJ6 1188 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CLEC18BQ6UXF7 455 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CCDC170Q8IYT3 715 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 NXPE1Q8N323 547 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 LILRA3Q8N6C8 439 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 OR4E2Q8NGC2 313 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ACTL9Q8TC94 416 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 HEXDCQ8WVB3 486 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 LCN9Q8WX39 176 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 TBL1YQ9BQ87 522 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ING2Q9H160 280 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 CHST8Q9H2A9 424 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 SRMSQ9H3Y6 488 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 C1GALT1Q9NS00 363 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 VPS4AQ9UN37 437 aa15.71■□□□□ 0.11
COL18A1-205ENST00000423214 PCDHGA9Q9Y5G4 932 aaKnown RBP15.71■□□□□ 0.11
COL18A1-205ENST00000423214 ANKRD12Q6UB98 2062 aa15.71■□□□□ 0.1
COL18A1-205ENST00000423214 SLC9B1P1A6NJY1 282 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 TMEM150CB9EJG8 249 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 DDX3YO15523 660 aaKnown RBP15.7■□□□□ 0.1
COL18A1-205ENST00000423214 PJA2O43164 708 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 RBP3P10745 1247 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 ATP1B2P14415 290 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-205ENST00000423214 CTNNA1P35221 906 aaKnown RBP15.7■□□□□ 0.1
COL18A1-205ENST00000423214 ADRA1AP35348 466 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 CETN2P41208 172 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 PTGIRP43119 386 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 CCL11P51671 97 aa15.7■□□□□ 0.1
COL18A1-205ENST00000423214 ZNF140P52738 457 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-205ENST00000423214 EIF3EP60228 445 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms