RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SLC6A4P31645 630 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZCCHC7Q8N3Z6 543 aaKnown RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 BEND7Q8N7W2 519 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 SNX19Q92543 992 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 RBM38Q9H0Z9 239 aaKnown RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 TPK1Q9H3S4 243 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 SMOC2Q9H3U7 446 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 INIPQ9NRY2 104 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF225Q9UK10 706 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 KPNA5O15131 536 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 PRAMEF1O95521 474 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 NDST3O95803 873 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ATXN1LP0C7T5 689 aaKnown RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 AKR1A1P14550 325 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 PTNP21246 168 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 RFC2P35250 354 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 SCNN1AP37088 669 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ARSFP54793 590 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 TNK2Q07912 1038 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 EPS8Q12929 822 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 DMC1Q14565 340 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 NECAB2Q7Z6G3 386 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 PLD3Q8IV08 490 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 BTN2A3PQ96KV6 586 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 CGREF1Q99674 301 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ACAT2Q9BWD1 397 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 RAD21L1Q9H4I0 556 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ELOVL6Q9H5J4 265 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 MBLAC1A4D2B0 266 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 OR2AG2A6NM03 316 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 SCAMP1O15126 338 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 C8BP07358 591 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 CD97P48960 835 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 NCS1P62166 190 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 ABRQ12979 859 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 APOFQ13790 326 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 GTF2H2Q13888 395 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 MAPRE1Q15691 268 aaKnown RBP12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 GTF2H2CQ6P1K8 395 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 ANKS3Q6ZW76 656 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 C11orf96Q7Z7L8 435 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 TICAM1Q8IUC6 712 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 TNIP2Q8NFZ5 429 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 PROKR1Q8TCW9 393 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 SCLYQ96I15 445 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 INPP5KQ9BT40 448 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 OPTCQ9UBM4 332 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 PRRG1O14668 218 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 RAB41Q5JT25 222 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 DOK6Q6PKX4 331 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 KIAA0408Q6ZU52 694 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 SERPINA9Q86WD7 417 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF385DQ9H6B1 395 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 CARS2Q9HA77 564 aaKnown RBP12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 SEPT3Q9UH03 358 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 ANK1P16157 1881 aa12.98□□□□□ -0.33
TNFRSF8-203ENST00000417814 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 RGS5O15539 181 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 CKMP06732 381 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 PFKLP17858 780 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 EPHA2P29317 976 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 HNF4AP41235 474 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 SPCS2Q15005 226 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 SOWAHCQ53LP3 525 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 BROXQ5VW32 411 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 OR4F3Q6IEY1 312 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 SULT1C3Q6IMI6 304 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 Q6ZSR9 355 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 HORMAD1Q86X24 394 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 ATOH8Q96SQ7 321 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 AGPAT4Q9NRZ5 378 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 ERVK-18Q9QC07 812 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 DNMT3AQ9Y6K1 912 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 C2orf78A6NCI8 922 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 A6NL46 340 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 A8MV72 311 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 FAM20BO75063 409 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 MLYCDO95822 493 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 OPRL1P41146 370 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 OR1E2P47887 323 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 DNAJB13P59910 316 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 SERINC3Q13530 473 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 ADRM1Q16186 407 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
TNFRSF8-203ENST00000417814 LKAAEAR1Q8TD35 194 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms