RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 HLCSP50747 726 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 ALDH3A2P51648 485 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 CLCN4P51793 760 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 KPNA1P52294 538 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 CHRNB3Q05901 458 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PWP1Q13610 501 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 SLC44A4Q53GD3 710 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 SPANXN4Q5MJ08 99 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 C10orf111Q8N326 155 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 OR2T12Q8NG77 320 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 EGFL8Q99944 293 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PFDN4Q9NQP4 134 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 SLC25A37Q9NYZ2 338 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 CIDEBQ9UHD4 219 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 ADGRE2Q9UHX3 823 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 CCL27Q9Y4X3 112 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PCDHGA8Q9Y5G5 932 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 U3KQV3 271 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 G3V2T6 193 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PRMT5O14744 637 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PFDN6O15212 129 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 DEAF1O75398 565 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 KCNH1O95259 989 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 ILF2Q12905 390 aaKnown RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 KIAA0040Q15053 153 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 FAM98BQ52LJ0 330 aaKnown RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 FAM117BQ6P1L5 589 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 R3HCC1LQ7Z5L2 792 aaKnown RBP14.23□□□□□ -0.13
HDAC9-208ENST00000417496 SERPINA9Q86WD7 417 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 ZDHHC13Q8IUH4 622 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 CARNMT1Q8N4J0 409 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 PDPRQ8NCN5 879 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 TBC1D15Q8TC07 691 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 SLC13A3Q8WWT9 602 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 NUDT4Q9NZJ9 180 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 KLQ9UEF7 1012 aa14.23□□□□□ -0.13
HDAC9-208ENST00000417496 TMEM88BA6NKF7 163 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 ARVCFO00192 962 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 GSTA4O15217 222 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SLC25A14O95258 325 aaPredicted RBP14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PRAMEF1O95521 474 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 CST1P01037 141 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 THRBP10828 461 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 OR1D2P34982 312 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 DAG1Q14118 895 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PCBP2Q15366 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC9-208ENST00000417496 MEP1AQ16819 746 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SULT1C3Q6IMI6 304 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 NCEH1Q6PIU2 408 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 MSRB3Q8IXL7 192 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SLC22A15Q8IZD6 547 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 DBF4BQ8NFT6 615 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 GTF2H4Q92759 462 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 ITCHQ96J02 903 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 CASD1Q96PB1 797 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 CDH7Q9ULB5 785 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF711Q9Y462 761 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 ANKRD36A6QL64 1941 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 A0A1B0GVM2 712 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SH3PXD2BA1X283 911 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PRKD3O94806 890 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PSMA3P25788 255 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PSMD7P51665 324 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 FCGRTP55899 365 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 RHOAP61586 193 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 CRY1Q16526 586 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 MAPKAPK3Q16644 382 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 HECTD3Q5T447 861 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 XAF1Q6GPH4 301 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 GCNT7Q6ZNI0 430 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 LIX1Q8N485 282 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 PAF1Q8N7H5 531 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 WFDC5Q8TCV5 224 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SLC22A17Q8WUG5 538 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 SNX19Q92543 992 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 DOK1Q99704 481 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 AMBRA1Q9C0C7 1298 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 LHPPQ9H008 270 aa14.22□□□□□ -0.13
HDAC9-208ENST00000417496 J3QRK9 145 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF701M0R085 212 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ARNTLO00327 626 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 SEC22BO75396 215 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 OTCP00480 354 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 NPPAP01160 153 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 C1QCP02747 245 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GSNP06396 782 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 AGXTP21549 392 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 CACNG1Q06432 222 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ADGRF1Q5T601 910 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ANKRD26P1Q6NSI1 321 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 SPESP1Q6UW49 350 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 SUSD1Q6UWL2 747 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 TMEM179BQ7Z7N9 219 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 SAPCD2Q86UD0 394 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms