RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ITPRIPL1Q6GPH6 555 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 LCN10Q6JVE6 187 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 OR4E2Q8NGC2 313 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 OR13C4Q8NGS5 318 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 LRFN5Q96NI6 719 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 CCM2Q9BSQ5 444 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 ING2Q9H160 280 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 MLXIPLQ9NP71 852 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 POMT2Q9UKY4 750 aa14.42□□□□□ -0.1
RPS28-201ENST00000417088 SLC9B1P1A6NJY1 282 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 TTLL8A6PVC2 850 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 MEN1O00255 615 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 LCA5LO95447 670 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 KLK3P07288 261 aaPredicted RBP14.41□□□□□ -0.1
RPS28-201ENST00000417088 PSMB4P28070 264 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 PRLHRP49683 370 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 PGDP52209 483 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 ABRQ12979 859 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 KRT33BQ14525 404 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 C11orf63Q6NUN7 778 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 ACVR1CQ8NER5 493 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 HM13Q8TCT9 377 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 ADAMTS17Q8TE56 1095 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 DCUN1D1Q96GG9 259 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 SLC25A23Q9BV35 468 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 TLR10Q9BXR5 811 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 FAM96AQ9H5X1 160 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 ACSS2Q9NR19 701 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 C1GALT1Q9NS00 363 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 CRLS1Q9UJA2 301 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 AAR2Q9Y312 384 aaKnown RBP14.41□□□□□ -0.1
RPS28-201ENST00000417088 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
RPS28-201ENST00000417088 PCDHGA9Q9Y5G4 932 aaKnown RBP14.41□□□□□ -0.1
RPS28-201ENST00000417088 HEBP2Q9Y5Z4 205 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 TNRC6AQ8NDV7 1962 aaKnown RBP14.41□□□□□ -0.1
RPS28-201ENST00000417088 SEC16AO15027 2179 aa14.41□□□□□ -0.1
RPS28-201ENST00000417088 C17orf113A0A1B0GUU1 675 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 BLACEA4D250 179 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 CRTAMO95727 393 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 RAB40ALP0C0E4 278 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 RALBP11234 206 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 CDH3P22223 829 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 RORAP35398 523 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 PTGIRP43119 386 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 UQCRFS1P47985 274 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
RPS28-201ENST00000417088 GSDMDP57764 484 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 COPS2P61201 443 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 TMPRSS15P98073 1019 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 OTUD4Q01804 1114 aaKnown RBP14.4□□□□□ -0.1
RPS28-201ENST00000417088 PRKAA1Q13131 559 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 NADK2Q4G0N4 442 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ZNF789Q5FWF6 425 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ANKRD20A2Q5SQ80 823 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 CCDC181Q5TID7 509 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ANKRD20A1Q5TYW2 823 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ANKRD20A3Q5VUR7 823 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 PAPD7Q5XG87 772 aaKnown RBP14.4□□□□□ -0.1
RPS28-201ENST00000417088 DENND5AQ6IQ26 1287 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 DSELQ8IZU8 1212 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 NXPE1Q8N323 547 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ENDOVQ8N8Q3 282 aaKnown RBP14.4□□□□□ -0.1
RPS28-201ENST00000417088 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 GALNT11Q8NCW6 608 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 OR1L3Q8NH93 324 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ACTL9Q8TC94 416 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 LCN9Q8WX39 176 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 CPT1BQ92523 772 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ULK4Q96C45 1275 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 COPS8Q99627 209 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 NRTNQ99748 197 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 SRMSQ9H3Y6 488 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 PCDHA13Q9Y5I0 950 aa14.4□□□□□ -0.1
RPS28-201ENST00000417088 ICE1Q9Y2F5 2266 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CCDC66A2RUB6 948 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 MATN2O00339 956 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 BTN3A3O00478 584 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CCL22O00626 93 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 VPS4BO75351 444 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CEACAM4O75871 244 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CAPN1P07384 714 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 RBP3P10745 1247 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 ATP1B2P14415 290 aaPredicted RBP14.39□□□□□ -0.11
RPS28-201ENST00000417088 ST6GAL1P15907 406 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 ITGALP20701 1170 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PTMSP20962 102 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 GNLYP22749 145 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PRDX3P30048 256 aaKnown RBP14.39□□□□□ -0.11
RPS28-201ENST00000417088 PREPP48147 710 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PRPSAP1Q14558 356 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 ZNF658BQ4V348 819 aaPredicted RBP14.39□□□□□ -0.11
RPS28-201ENST00000417088 MICALCLQ6ZW33 695 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 SNX20Q7Z614 316 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
RPS28-201ENST00000417088 RNF214Q8ND24 703 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PHC3Q8NDX5 983 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CPT1CQ8TCG5 803 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 HEXDCQ8WVB3 486 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 CLIP3Q96DZ5 547 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 FERD3LQ96RJ6 166 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms