RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 KLK3P07288 261 aaPredicted RBP14.05□□□□□ -0.16
PAF1-202ENST00000416728 ITGALP20701 1170 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 CDH3P22223 829 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 CD97P48960 835 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 PRLHRP49683 370 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 GSDMDP57764 484 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 EIF3EP60228 445 aaKnown RBP14.05□□□□□ -0.16
PAF1-202ENST00000416728 GPS2Q13227 327 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 OLIG2Q13516 323 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 ANKRD20A2Q5SQ80 823 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 ANKRD20A1Q5TYW2 823 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 ANKRD20A3Q5VUR7 823 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 CAPRIN2Q6IMN6 1127 aaKnown RBP14.05□□□□□ -0.16
PAF1-202ENST00000416728 FBXO38Q6PIJ6 1188 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 NXPE1Q8N323 547 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 LILRA3Q8N6C8 439 aaPredicted RBP14.05□□□□□ -0.16
PAF1-202ENST00000416728 TC2NQ8N9U0 490 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 ACVR1CQ8NER5 493 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 OR13C4Q8NGS5 318 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 HEXDCQ8WVB3 486 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 LCN9Q8WX39 176 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 CPT1BQ92523 772 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 PPM1MQ96MI6 270 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 COPS8Q99627 209 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 TLR10Q9BXR5 811 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 CHST8Q9H2A9 424 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 ACSS2Q9NR19 701 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 POMT2Q9UKY4 750 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 EFR3BQ9Y2G0 817 aa14.05□□□□□ -0.16
PAF1-202ENST00000416728 NAV2Q8IVL1 2488 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 DOPEY2Q9Y3R5 2298 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 CCDC66A2RUB6 948 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 GSAPA4D1B5 854 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 ARGFXA6NJG6 315 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 SLC9B1P1A6NJY1 282 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 KCNN4O15554 427 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 PJA2O43164 708 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 RBP3P10745 1247 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 ATP1B2P14415 290 aaPredicted RBP14.04□□□□□ -0.16
PAF1-202ENST00000416728 CTNNA1P35221 906 aaKnown RBP14.04□□□□□ -0.16
PAF1-202ENST00000416728 HADHAP40939 763 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 PGDP52209 483 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
PAF1-202ENST00000416728 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 CHAF1BQ13112 559 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 IL10RAQ13651 578 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 LAMB3Q13751 1172 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 IZUMO3Q5VZ72 239 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 CPZQ66K79 652 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
PAF1-202ENST00000416728 ZNF517Q6ZMY9 492 aaPredicted RBP14.04□□□□□ -0.16
PAF1-202ENST00000416728 SNX20Q7Z614 316 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 CCDC170Q8IYT3 715 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 SLC38A9Q8NBW4 561 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 LRRC45Q96CN5 670 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 CLIP3Q96DZ5 547 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 LRFN5Q96NI6 719 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 PPP1R2P1Q96PQ5 205 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 C19orf43Q9BQ61 176 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 SLC25A23Q9BV35 468 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 ING2Q9H160 280 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 SRMSQ9H3Y6 488 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 FAM96AQ9H5X1 160 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 C1GALT1Q9NS00 363 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 PCDHA3Q9Y5H8 950 aa14.04□□□□□ -0.16
PAF1-202ENST00000416728 C17orf113A0A1B0GUU1 675 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 TTLL8A6PVC2 850 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 MEN1O00255 615 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 IFRD1O00458 451 aaPredicted RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 MAP3K7O43318 606 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 GP1BBP13224 206 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 CYLC1P35663 651 aaPredicted RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 PREPP48147 710 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 CCL11P51671 97 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 MSLNQ13421 630 aaPredicted RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 PRAMEF17Q5VTA0 474 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 FERD3LQ96RJ6 166 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 FAM118BQ9BPY3 351 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 COG4Q9H9E3 785 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 SYTL2Q9HCH5 934 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 FEZ2Q9UHY8 353 aaPredicted RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 SNX7Q9UNH6 387 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 PCDHGA9Q9Y5G4 932 aaKnown RBP14.03□□□□□ -0.16
PAF1-202ENST00000416728 RELNP78509 3460 aa14.03□□□□□ -0.16
PAF1-202ENST00000416728 CCL22O00626 93 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 VPS4BO75351 444 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 RAB40ALP0C0E4 278 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 CYP2A7P20853 494 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 MC4RP32245 332 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 PTPN7P35236 360 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 CETN2P41208 172 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 PTGIRP43119 386 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 ABRQ12979 859 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms