RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SLC25A52Q3SY17 297 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ATP6AP1LQ52LC2 224 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ZNF438Q7Z4V0 828 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 NRARPQ7Z6K4 114 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 EID3Q8N140 333 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 OR6P1Q8NGX9 317 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 SLC47A1Q96FL8 570 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 MYOCQ99972 504 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 TBL1YQ9BQ87 522 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ARHGAP39Q9C0H5 1083 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ABHD16BQ9H3Z7 469 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 FZD8Q9H461 694 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 PIGVQ9NUD9 493 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 TAS2R9Q9NYW1 312 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 USE1Q9NZ43 259 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 RCOR3Q9P2K3 495 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ABT1Q9ULW3 272 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ARIH1Q9Y4X5 557 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 NME7Q9Y5B8 376 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 PCDHGB6Q9Y5F9 930 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 TRIP12Q14669 1992 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 DFFAO00273 331 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 MATN4O95460 622 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 HPRP00739 348 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 CYP11A1P05108 521 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 PFKLP17858 780 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 IGFBP6P24592 240 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 HERVK_113P63132 956 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 SLC10A6Q3KNW5 377 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 DUSP28Q4G0W2 176 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 SPANXN2Q5MJ10 180 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 MARCH8Q5T0T0 291 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 SDE2Q6IQ49 451 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 GRAMD2AQ8IUY3 354 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 PHYKPLQ8IUZ5 450 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 TMEM199Q8N511 208 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 DNAJB3Q8WWF6 145 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 FAM162AQ96A26 154 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 EMID1Q96A84 441 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 NACC2Q96BF6 587 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 FYTTD1Q96QD9 318 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 HBEGFQ99075 208 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 BCL7BQ9BQE9 202 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 THUMPD3Q9BV44 507 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 FSD1LQ9BXM9 530 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ERVK-6Q9BXR3 956 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 TNKS2Q9H2K2 1166 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 ACOT13Q9NPJ3 140 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 GPR45Q9Y5Y3 372 aa14.49□□□□□ -0.09
NCKIPSD-204ENST00000416649 METTL15A6NJ78 407 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PRKD3O94806 890 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 AKAP5P24588 427 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 FCGRTP55899 365 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 RCAN2Q14206 197 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 Q5BKY6 102 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 SYT6Q5T7P8 510 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 HECTD2Q5U5R9 776 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 LAIR1Q6GTX8 287 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PNCKQ6P2M8 343 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 RAB44Q7Z6P3 723 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 ZDHHC17Q8IUH5 632 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 AMER2Q8N7J2 671 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 C2CD4AQ8NCU7 369 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 UBE2FQ969M7 185 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PTERQ96BW5 349 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 TEKT5Q96M29 485 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 VPS35Q96QK1 796 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 ACOX2Q99424 681 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PHOX2BQ99453 314 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 UGT2B28Q9BY64 529 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 GOLGA2P5Q9HBQ8 144 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 GTF2IRD1Q9UHL9 959 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NAALAD2Q9Y3Q0 740 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 XIRP2A4UGR9 3374 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NCF1BA6NI72 391 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NCF1CA8MVU1 366 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 KRT6AP02538 564 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 KRT6BP04259 564 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NCF1P14598 390 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PAMP19021 973 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 GADD45AP24522 165 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 DGKQP52824 942 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 DET1Q7L5Y6 550 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 TLK2Q86UE8 772 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 TCAIMQ8N3R3 496 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 ST6GAL2Q96JF0 529 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 CEP19Q96LK0 163 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NECTIN4Q96NY8 510 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 AMBNQ9NP70 447 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 FBXO9Q9UK97 447 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 CLDN5O00501 218 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PRSS23O95084 383 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 DNAJB1P25685 340 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 LIPAP38571 399 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 NDUFV1P49821 464 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 CD83Q01151 205 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 KRR1Q13601 381 aaKnown RBP14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 GTF2H3Q13889 308 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 TYSND1Q2T9J0 566 aa14.48□□□□□ -0.09
NCKIPSD-204ENST00000416649 PLEKHG6Q3KR16 790 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms