RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 OR6C74A6NCV1 312 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 MROH6A6NGR9 719 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 HADHAP40939 763 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 PDE1BQ01064 536 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 TUBB3Q13509 450 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 IL11RAQ14626 422 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 P3H1Q32P28 736 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 ZRANB3Q5FWF4 1079 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 DNTTIP2Q5QJE6 756 aaKnown RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 PWWP2BQ6NUJ5 590 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 BORAQ6PGQ7 559 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 PRICKLE2Q7Z3G6 844 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 TMEM135Q86UB9 458 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 SLC13A5Q86YT5 568 aaPredicted RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 RASGRP3Q8IV61 690 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 OR13J1Q8NGT2 312 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 C1orf54Q8WWF1 131 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 UBXN4Q92575 508 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 KIAA1143Q96AT1 154 aaPredicted RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 DCUN1D1Q96GG9 259 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 HRASLS2Q9NWW9 162 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 GEMIN8Q9NWZ8 242 aaKnown RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 SLC2A6Q9UGQ3 507 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 ACSL5Q9ULC5 683 aa14.71□□□□□ -0.05
UBXN4-203ENST00000416538 ASH1LQ9NR48 2969 aaKnown RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 SPENQ96T58 3664 aaKnown RBP14.71□□□□□ -0.06
UBXN4-203ENST00000416538 CCDC162PA2VCL2 907 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
UBXN4-203ENST00000416538 DLSTP36957 453 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 GPR19Q15760 415 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 GPR33Q49SQ1 333 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 C6orf15Q6UXA7 325 aaPredicted RBP14.7□□□□□ -0.06
UBXN4-203ENST00000416538 OOSP2Q86WS3 158 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 PPP1R3BQ86XI6 285 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 D2HGDHQ8N465 521 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 SIDT2Q8NBJ9 832 aaKnown RBP14.7□□□□□ -0.06
UBXN4-203ENST00000416538 CT55Q8WUE5 264 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 STYXQ8WUJ0 223 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF778Q96MU6 729 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 CD180Q99467 661 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 TRIT1Q9H3H1 467 aaKnown RBP14.7□□□□□ -0.06
UBXN4-203ENST00000416538 ETNK1Q9HBU6 452 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 POMT2Q9UKY4 750 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
UBXN4-203ENST00000416538 KLHL33A6NCF5 533 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 BTN3A3O00478 584 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF189O75820 626 aaPredicted RBP14.69□□□□□ -0.06
UBXN4-203ENST00000416538 RALBP11234 206 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 POLR2CP19387 275 aaPredicted RBP14.69□□□□□ -0.06
UBXN4-203ENST00000416538 MSNP26038 577 aaKnown RBP14.69□□□□□ -0.06
UBXN4-203ENST00000416538 CACNG1Q06432 222 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 LAMB3Q13751 1172 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 SEMA3AQ14563 771 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 SEL1L2Q5TEA6 688 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 PRAMEF17Q5VTA0 474 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 C16orf46Q6P387 395 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 NAPRTQ6XQN6 538 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 PHC3Q8NDX5 983 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 OR4E2Q8NGC2 313 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 STAMBPL1Q96FJ0 436 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 HGH1Q9BTY7 390 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 FGF21Q9NSA1 209 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 BTRCQ9Y297 605 aa14.69□□□□□ -0.06
UBXN4-203ENST00000416538 C17orf113A0A1B0GUU1 675 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 CFAP99D6REC4 459 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 BTN3A1O00481 513 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SUN1O94901 812 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 IFNB1P01574 187 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 NTRK1P04629 796 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 PVRP15151 417 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 RPS18P62269 152 aaKnown RBP14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ABRQ12979 859 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 KCNAB2Q13303 367 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SEMA5AQ13591 1074 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SNX1Q13596 522 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 DNASE1L3Q13609 305 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 DEFB109BQ30KR1 87 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF789Q5FWF6 425 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 KLHL35Q6PF15 583 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF534Q76KX8 674 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 TAS2R42Q7RTR8 314 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 KMT5CQ86Y97 462 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 RNF10Q8N5U6 811 aaKnown RBP14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SLC38A9Q8NBW4 561 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ACVR1CQ8NER5 493 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 OR52E1Q8NGJ3 308 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 LKAAEAR1Q8TD35 194 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF501Q96CX3 271 aaPredicted RBP14.68□□□□□ -0.06
UBXN4-203ENST00000416538 CCM2Q9BSQ5 444 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 TLR10Q9BXR5 811 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SLC25A18Q9H1K4 315 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 ADNPQ9H2P0 1102 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 XKR8Q9H6D3 395 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 LHX9Q9NQ69 397 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 SMARCAL1Q9NZC9 954 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 RARRES3Q9UL19 164 aa14.68□□□□□ -0.06
UBXN4-203ENST00000416538 NUP210LQ5VU65 1888 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 ANKRD12Q6UB98 2062 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms