RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RHOXF2Q9BQY4 288 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 LRRN3Q9H3W5 708 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 EPB41L1Q9H4G0 881 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 FAM8A1Q9UBU6 413 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 COLEC10Q9Y6Z7 277 aa16.11■□□□□ 0.17
LINC00398-201ENST00000414407 PIKFYVEQ9Y2I7 2098 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 TCRBV9S1A1TA0A576 114 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 B4GAT1O43505 415 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 AHSGP02765 367 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 ITGB6P18564 788 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 CHRM3P20309 590 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 CD9P21926 228 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 GABRB3P28472 473 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 PDHA2P29803 388 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 PREPP48147 710 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 HSPA14Q0VDF9 509 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 ZNF549Q6P9A3 640 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 CNSTQ6PJW8 725 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 TMPRSS7Q7RTY8 843 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
LINC00398-201ENST00000414407 CDKL2Q92772 493 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 AARSD1Q9BTE6 412 aaKnown RBP16.1■□□□□ 0.17
LINC00398-201ENST00000414407 IMP3Q9NV31 184 aaKnown RBP16.1■□□□□ 0.17
LINC00398-201ENST00000414407 KCNK4Q9NYG8 393 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 WASF3Q9UPY6 502 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 CDYLQ9Y232 598 aa16.1■□□□□ 0.17
LINC00398-201ENST00000414407 IGHV1OR21-1A0A087WYE8 117 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 A0A1W2PQM1 296 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 FAM221BA6H8Z2 402 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 E5RI56 91 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 NIPSNAP2O75323 286 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
LINC00398-201ENST00000414407 RPLP0P05388 317 aaKnown RBP16.09■□□□□ 0.17
LINC00398-201ENST00000414407 ACADLP28330 430 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 ALDH4A1P30038 563 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 ATP5DP30049 168 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 STX2P32856 288 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 CLCN7P51798 805 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 OR1D5P58170 312 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 CCL7P80098 99 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 GBX1Q14549 363 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 SLMAPQ14BN4 828 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 CHCHD4Q8N4Q1 142 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 Q8N9G6 341 aaPredicted RBP16.09■□□□□ 0.17
LINC00398-201ENST00000414407 TFGQ92734 400 aaPredicted RBP16.09■□□□□ 0.17
LINC00398-201ENST00000414407 GRAMD1AQ96CP6 724 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 GFM1Q96RP9 751 aaKnown RBP16.09■□□□□ 0.17
LINC00398-201ENST00000414407 DPYSL5Q9BPU6 564 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 MVB12BQ9H7P6 319 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 ASXL3Q9C0F0 2248 aa16.09■□□□□ 0.17
LINC00398-201ENST00000414407 CACNA1AO00555 2505 aa16.08■□□□□ 0.17
LINC00398-201ENST00000414407 FAM159BA6NKW6 160 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 VPS26AO75436 327 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 MT-CO3P00414 261 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 CD1CP29017 333 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 SKIV2L2P42285 1042 aaKnown RBP16.08■□□□□ 0.16
LINC00398-201ENST00000414407 FOXC1Q12948 553 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 SPIDRQ14159 915 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 GPR18Q14330 331 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 BRD3Q15059 726 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 TTLL9Q3SXZ7 439 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 HES3Q5TGS1 186 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 UGT3A1Q6NUS8 523 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 NAPRTQ6XQN6 538 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
LINC00398-201ENST00000414407 CAPN12Q6ZSI9 719 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 ZBTB2Q8N680 514 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 DCBLD1Q8N8Z6 715 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 OR10G6Q8NH81 332 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00398-201ENST00000414407 KIR3DX1Q9H7L2 352 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 NFU1Q9UMS0 254 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 CLCA2Q9UQC9 943 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 MED16Q9Y2X0 877 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 DHRS7Q9Y394 339 aa16.08■□□□□ 0.16
LINC00398-201ENST00000414407 CFAP20Q9Y6A4 193 aaKnown RBP16.08■□□□□ 0.16
LINC00398-201ENST00000414407 D6RAR5 112 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 CPNE6O95741 557 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 C1QAP02745 245 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 TNFRSF8P28908 595 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 PHBP35232 272 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 SHC2P98077 582 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 NAB1Q13506 487 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 KRT33BQ14525 404 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 KYNUQ16719 465 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 UNC5DQ6UXZ4 953 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 STRA8Q7Z7C7 330 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 PIM3Q86V86 326 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 TBC1D21Q8IYX1 336 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 ACVR1CQ8NER5 493 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 AHCYL2Q96HN2 611 aaKnown RBP16.07■□□□□ 0.16
LINC00398-201ENST00000414407 DEPDC7Q96QD5 511 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 MCMBPQ9BTE3 642 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 SMYD2Q9NRG4 433 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 TAS2R13Q9NYV9 303 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 NINJ2Q9NZG7 142 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 SLC17A6Q9P2U8 582 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms