RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CDK5R2Q13319 367 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 AP5B1Q2VPB7 878 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PERM1Q5SV97 790 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 DCP2Q8IU60 420 aaKnown RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 CADM3Q8N126 398 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 SETD9Q8NE22 299 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 ZFP90Q8TF47 636 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 RORBQ92753 470 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 GTF2H4Q92759 462 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 FAM162AQ96A26 154 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 RHBDF1Q96CC6 855 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 LINGO1Q96FE5 620 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 SUSD3Q96L08 255 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 NSMCE3Q96MG7 304 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 ASB1Q9Y576 335 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 COMMD10Q9Y6G5 202 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 KDM1AO60341 852 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 JUNDP17535 347 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 NR4A1P22736 598 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 TTPAP49638 278 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 CLCN4P51793 760 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 TRIP4Q15650 581 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 LDLRAD1Q5T700 205 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 TMEM53Q6P2H8 277 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 GPR149Q86SP6 731 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 HS3ST5Q8IZT8 346 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 CARNMT1Q8N4J0 409 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 ARL10Q8N8L6 244 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 GLB1L3Q8NCI6 653 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 OR4K2Q8NGD2 314 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 OR10A6Q8NH74 314 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 CD200R1Q8TD46 325 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 EFHD2Q96C19 240 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 YIPF6Q96EC8 236 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 REXO5Q96IC2 774 aaKnown RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 UROC1Q96N76 676 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 THUMPD3Q9BV44 507 aaKnown RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 FBXO44Q9H4M3 255 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 PDFQ9HBH1 243 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 DCAF13Q9NV06 445 aaKnown RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 TMEFF2Q9UIK5 374 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 INTS6Q9UL03 887 aaKnown RBP17.34■□□□□ 0.37
SDCBP-202ENST00000413219 HSPE1-MOB4S4R3N1 261 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 MYO16Q9Y6X6 1858 aa17.34■□□□□ 0.37
SDCBP-202ENST00000413219 PTGES3LE9PB15 166 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 BCKDKO14874 412 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 PRKD3O94806 890 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 EIF2S1P05198 315 aaKnown RBP17.33■□□□□ 0.37
SDCBP-202ENST00000413219 ACVRL1P37023 503 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 MAD2L1Q13257 205 aaPredicted RBP17.33■□□□□ 0.37
SDCBP-202ENST00000413219 PRAMEF19Q5SWL8 479 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 C1QTNF12Q5T7M4 302 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 RAP1GAP2Q684P5 730 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 SCN4BQ8IWT1 228 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 MICU2Q8IYU8 434 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 SIDT2Q8NBJ9 832 aaKnown RBP17.33■□□□□ 0.37
SDCBP-202ENST00000413219 OR6Q1Q8NGQ2 317 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 EEF1AKMT1Q8WVE0 214 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 KCNJ9Q92806 393 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 ESAMQ96AP7 390 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 CDK15Q96Q40 435 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 CCDC90BQ9GZT6 254 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 DNMT3BQ9UBC3 853 aaKnown RBP17.33■□□□□ 0.37
SDCBP-202ENST00000413219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.33■□□□□ 0.37
SDCBP-202ENST00000413219 TPRKBQ9Y3C4 175 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 SPO11Q9Y5K1 396 aa17.33■□□□□ 0.37
SDCBP-202ENST00000413219 C2orf81A6NN90 581 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 MRPS14O60783 128 aaKnown RBP17.33■□□□□ 0.36
SDCBP-202ENST00000413219 E2F6O75461 281 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 NADKO95544 446 aaPredicted RBP17.33■□□□□ 0.36
SDCBP-202ENST00000413219 CXCR4P61073 352 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 IFITM3Q01628 133 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 LAPTM5Q13571 262 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 INAQ16352 499 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 ADPRMQ3LIE5 342 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 PLEKHG7Q6ZR37 379 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 RNF165Q6ZSG1 346 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 PRSS48Q7RTY5 328 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 GLT6D1Q7Z4J2 308 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 DNAJB8Q8NHS0 232 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 TBC1D20Q96BZ9 403 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 PDLIM5Q96HC4 596 aaKnown RBP17.33■□□□□ 0.36
SDCBP-202ENST00000413219 MGME1Q9BQP7 344 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 DUSP21Q9H596 190 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 ANKHQ9HCJ1 492 aa17.33■□□□□ 0.36
SDCBP-202ENST00000413219 EIF3LQ9Y262 564 aaKnown RBP17.33■□□□□ 0.36
SDCBP-202ENST00000413219 ZNF623O75123 536 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 NIPSNAP2O75323 286 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ANGPTL1O95841 491 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 OTCP00480 354 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 CD300CQ08708 224 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 TUSC3Q13454 348 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 PON2Q15165 354 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 MAPKAPK3Q16644 382 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 HIST2H2ACQ16777 129 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 RFTN2Q52LD8 501 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 RUNDC3AQ59EK9 446 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 CTSL3PQ5NE16 218 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms