RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CAPZBP47756 277 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 DR1Q01658 176 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSB-203ENST00000413002 PTK6Q13882 451 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 TGIF1Q15583 401 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 IZUMO3Q5VZ72 239 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 IGF2-ASQ6U949 168 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 LRRC69Q6ZNQ3 347 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 PLXDC1Q8IUK5 500 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 RBM12BQ8IXT5 1001 aaKnown RBP12.82□□□□□ -0.36
SSB-203ENST00000413002 PPIL6Q8IXY8 311 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 AGBL5Q8NDL9 886 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 ZNF248Q8NDW4 579 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 MCUQ8NE86 351 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 OR4E2Q8NGC2 313 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 PEX13Q92968 403 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 ZNF669Q96BR6 464 aaPredicted RBP12.82□□□□□ -0.36
SSB-203ENST00000413002 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 TTC1Q99614 292 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 DPYSL5Q9BPU6 564 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 TRIM31Q9BZY9 425 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 VPS37BQ9H9H4 285 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 MRM3Q9HC36 420 aaKnown RBP12.82□□□□□ -0.36
SSB-203ENST00000413002 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 PCYOX1Q9UHG3 505 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 SLC24A2Q9UI40 661 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 NBEAQ8NFP9 2946 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 ZFHX4Q86UP3 3567 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 UBA6A0AVT1 1052 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 KLHL33A6NCF5 533 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 IFRD1O00458 451 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 NDUFS3O75489 264 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 RASSF9O75901 435 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 FTH1P02794 183 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 MLNP12872 115 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 IVDP26440 423 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 CASQ1P31415 396 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 CCR7P32248 378 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 ABCG1P45844 678 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 EIF3BP55884 814 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 HSPA14Q0VDF9 509 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 SRSF6Q13247 344 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 DHX34Q14147 1143 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 SYTL3Q4VX76 610 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 ZNF789Q5FWF6 425 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 AARS2Q5JTZ9 985 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 HP1BP3Q5SSJ5 553 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 ANKS6Q68DC2 871 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 FBXO38Q6PIJ6 1188 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 UNC5BQ8IZJ1 945 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 TFGQ92734 400 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 SGSM3Q96HU1 749 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 SIGLEC10Q96LC7 697 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 KRT12Q99456 494 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 HGH1Q9BTY7 390 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 EPB41L1Q9H4G0 881 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 XKR8Q9H6D3 395 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 KIR3DX1Q9H7L2 352 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 XAB2Q9HCS7 855 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 APMAPQ9HDC9 416 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 KCND1Q9NSA2 647 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 HRASLS2Q9NWW9 162 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 SLC39A1Q9NY26 324 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 B3GALT1Q9Y5Z6 326 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 RPS6KL1Q9Y6S9 549 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
SSB-203ENST00000413002 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
SSB-203ENST00000413002 ZCWPW2A0A1B0GU75 182 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 FAM237BA0A1B0GVD1 139 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 SLC5A10A0PJK1 596 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 PRMT5O14744 637 aaPredicted RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 LIN7AO14910 233 aaPredicted RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 NVLO15381 856 aaKnown RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 C9P02748 559 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 POLR2CP19387 275 aaPredicted RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 FMO4P31512 558 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 PPARGP37231 505 aaPredicted RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 MAGEA3P43357 314 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 TTPAP49638 278 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 ETF1P62495 437 aaKnown RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 SH3BP2P78314 561 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 TLE3Q04726 772 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 CACHD1Q5VU97 1274 aa12.8□□□□□ -0.36
SSB-203ENST00000413002 PTRHD1Q6GMV3 140 aaKnown RBP12.8□□□□□ -0.36
SSB-203ENST00000413002 KIAA0930Q6ICG6 404 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms