RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NELL1Q92832 810 aa13.7□□□□□ -0.22
CLTCL1-201ENST00000412649 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
CLTCL1-201ENST00000412649 GFM1Q96RP9 751 aaKnown RBP13.7□□□□□ -0.22
CLTCL1-201ENST00000412649 OSMRQ99650 979 aa13.7□□□□□ -0.22
CLTCL1-201ENST00000412649 ABCB9Q9NP78 766 aa13.7□□□□□ -0.22
CLTCL1-201ENST00000412649 SUV39H1O43463 412 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 PGRP06401 933 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 DNAJA1P31689 397 aaKnown RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 BICRALQ6AI39 1079 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 AFTPHQ6ULP2 937 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SEMA3CQ99985 751 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SLA2Q9H6Q3 261 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SNTG1Q9NSN8 517 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 FABP12A6NFH5 140 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 FAM220BPB1ANY3 271 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 CD72P21854 359 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SPIBQ01892 262 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 LARP4Q71RC2 724 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ADAMTSL2Q86TH1 951 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SYT12Q8IV01 421 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 DUS3LQ96G46 650 aaKnown RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 Q96MT0 163 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 KLHL5Q96PQ7 755 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 GPR21Q99679 349 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ACAT2Q9BWD1 397 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 DERAQ9Y315 318 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 WBP4O75554 376 aaKnown RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 RPP40O75818 363 aaKnown RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 IL6P05231 212 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ICAM3P32942 547 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 GALNT2Q10471 571 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 LAPTM4AQ15012 233 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 TRIM48Q8IWZ4 208 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 LPCAT1Q8NF37 534 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 FRMD6Q96NE9 622 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 SDR39U1Q9NRG7 319 aaPredicted RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 CRLS1Q9UJA2 301 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 PCDHGB6Q9Y5F9 930 aa13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 MAGED1Q9Y5V3 778 aaPredicted RBP13.69□□□□□ -0.22
CLTCL1-201ENST00000412649 RGS20O76081 388 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SLC25A27O95847 323 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 PRLP01236 227 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 TAF1P21675 1872 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 MXD1Q05195 221 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SNAP47Q5SQN1 464 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 LINC00299Q6ZSB3 139 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 PSD2Q9BQI7 771 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 BEX2Q9BXY8 128 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 FAM126AQ9BYI3 521 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 AIG1Q9NVV5 245 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 HSPB11Q9Y547 144 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 F8W810 466 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 I3L521 148 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 CREG1O75629 220 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 AP2A2O94973 939 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SNX4O95219 450 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 COL6A1P12109 1028 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 COX7A2P14406 83 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 LMO2P25791 158 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 RORCP51449 518 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 CDK5R2Q13319 367 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 KIAA1614Q5VZ46 1190 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 OR8H3Q8N146 312 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 GLB1L3Q8NCI6 653 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SERHL2Q9H4I8 314 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SERHLQ9NQF3 203 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 FGF1P05230 155 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 SLC9A3P48764 834 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 HCAR3P49019 387 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 EMX2Q04743 252 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 CD300CQ08708 224 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 EPHX4Q8IUS5 362 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 ISL2Q96A47 359 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 FCRL2Q96LA5 508 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 FAM8A1Q9UBU6 413 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 MGAT4DA6NG13 374 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 OR51F1A6NGY5 319 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 KMOO15229 486 aa13.68□□□□□ -0.22
CLTCL1-201ENST00000412649 ORC5O43913 435 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms