RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 EPN1Q9Y6I3 576 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 IGLV3-16A0A075B6K0 115 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 TRBV5-4A0A0C4DH59 114 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 UBA6A0AVT1 1052 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 GRID2IPA4D2P6 1211 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 C5orf60A6NFR6 353 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 SLC9B1P1A6NJY1 282 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 C2orf81A6NN90 581 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 BTN3A3O00478 584 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 CAPN1P07384 714 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 PVRP15151 417 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 TPH1P17752 444 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 PMS2P54278 862 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 GDF10P55107 478 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 COPS2P61201 443 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 ACY1Q03154 408 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 ITPRIPL1Q6GPH6 555 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 DARS2Q6PI48 645 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 TMEM151BQ8IW70 566 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 PIANPQ8IYJ0 282 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 CCDC170Q8IYT3 715 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 CLDN19Q8N6F1 224 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 MIB2Q96AX9 1013 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 TBL1YQ9BQ87 522 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 KLHL25Q9H0H3 589 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 CHST8Q9H2A9 424 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 ARNT2Q9HBZ2 717 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 CRLS1Q9UJA2 301 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 POMT2Q9UKY4 750 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 ACSL5Q9ULC5 683 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 BTRCQ9Y297 605 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 USP9YO00507 2555 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-203ENST00000411971 BTN3A1O00481 513 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 HCRTR1O43613 425 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 SCRG1O75711 98 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 ZBTB11O95625 1053 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 CCNYL3P0C7X3 344 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TPBGLP0DKB5 382 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 ST6GAL1P15907 406 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 MC4RP32245 332 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TNNT3P45378 269 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 PREPP48147 710 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TUBB4BP68371 445 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 SEMA5AQ13591 1074 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TUBB2AQ13885 445 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 PLEKHS1Q5SXH7 462 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 CCDC181Q5TID7 509 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TCTN3Q6NUS6 607 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 SNX20Q7Z614 316 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 OOSP2Q86WS3 158 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 KMT5CQ86Y97 462 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 CDKL3Q8IVW4 592 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 APLFQ8IW19 511 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 OR1L3Q8NH93 324 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 HM13Q8TCT9 377 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 FCRL4Q96PJ5 515 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 CD180Q99467 661 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 TUBB2BQ9BVA1 445 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 XKR8Q9H6D3 395 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 COG4Q9H9E3 785 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 KCND1Q9NSA2 647 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 KCND3Q9UK17 655 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 MAN2B2Q9Y2E5 1009 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 EFR3BQ9Y2G0 817 aa16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCAMP4-203ENST00000411971 CCDC78A2IDD5 438 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 CCDC66A2RUB6 948 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 OR51F1A6NGY5 319 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 C21orf140B9A014 251 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 RFPL1O75677 317 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 CTSBP07858 339 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 SLC35G4P0C7Q5 338 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 ATP1B2P14415 290 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 PTPN4P29074 926 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 RORAP35398 523 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 ZNF75DP51815 510 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 KLRB1Q12918 225 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 SEPT6Q14141 434 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 SPA17Q15506 151 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 UGT8Q16880 541 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 KLHL35Q6PF15 583 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 NAPRTQ6XQN6 538 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 ASB18Q6ZVZ8 466 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 SERPINA9Q86WD7 417 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 TMEM126BQ8IUX1 230 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 ADAMTS17Q8TE56 1095 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 FARSAQ9Y285 508 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 AAR2Q9Y312 384 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 PRRC2CQ9Y520 2896 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-203ENST00000411971 MKRN2OSH3BPM6 223 aa16.02■□□□□ 0.16
SCAMP4-203ENST00000411971 RECKO95980 971 aa16.02■□□□□ 0.16
SCAMP4-203ENST00000411971 MT-ND3P03897 115 aa16.02■□□□□ 0.16
SCAMP4-203ENST00000411971 PRDX3P30048 256 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms