RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB2-229ENST00000411527 POMT2Q9UKY4 750 aa13.86□□□□□ -0.19
HLA-DQB2-229ENST00000411527 UNC79Q9P2D8 2635 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 KLHL33A6NCF5 533 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 TMEM150CB9EJG8 249 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 KRT86O43790 486 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CST8O60676 142 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PRAMEF1O95521 474 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PECAM1P16284 738 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CYP2A7P20853 494 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 NDUFS1P28331 727 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PREPP48147 710 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 RRADP55042 308 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 RAPSNQ13702 412 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ATP1A4Q13733 1029 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 TFDP2Q14188 446 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ASTE1Q2TB18 679 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 FAM198BQ6UWH4 519 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SYTL1Q8IYJ3 562 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CFAP206Q8IYR0 622 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ZNF567Q8N184 647 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 C19orf60Q96EN9 201 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SGSM3Q96HU1 749 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 FCRL5Q96RD9 977 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SLC7A5P2Q9GIP4 190 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SRMSQ9H3Y6 488 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ASB8Q9H765 288 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SYTL2Q9HCH5 934 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PCMTD2Q9NV79 361 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 IFNKQ9P0W0 207 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SERTAD3Q9UJW9 196 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PIKFYVEQ9Y2I7 2098 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CCDC88CQ9P219 2028 aa13.85□□□□□ -0.19
HLA-DQB2-229ENST00000411527 GSAPA4D1B5 854 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 MAP3K7O43318 606 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 AKR1B10O60218 316 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PYGMP11217 842 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PRDX3P30048 256 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CDKN2BP42772 138 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 MPP3Q13368 585 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PLEKHN1Q494U1 663 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ZNF789Q5FWF6 425 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 KAZNQ674X7 775 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ZNF787Q6DD87 383 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 MAMDC2Q7Z304 686 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 LILRA3Q8N6C8 439 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 LCN9Q8WX39 176 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 FERD3LQ96RJ6 166 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SMAD5Q99717 465 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 CCM2Q9BSQ5 444 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ERRFI1Q9UJM3 462 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 HEBP2Q9Y5Z4 205 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 ARL5AQ9Y689 179 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 HIVEP3Q5T1R4 2406 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 PCSK5Q92824 1860 aa13.84□□□□□ -0.19
HLA-DQB2-229ENST00000411527 SEC16AO15027 2179 aa13.83□□□□□ -0.19
HLA-DQB2-229ENST00000411527 C2orf81A6NN90 581 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 MATN2O00339 956 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SGTAO43765 313 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CLDN1O95832 211 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 AGTP01019 485 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ST6GAL1P15907 406 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SLC1A1P43005 524 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 LMAN1P49257 510 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 NCF4Q15080 339 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 NR6A1Q15406 480 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 KYNUQ16719 465 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 BCL7AQ4VC05 210 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RAB43Q86YS6 212 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ACVR1CQ8NER5 493 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 OR4K2Q8NGD2 314 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 P3H4Q92791 437 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SNRNP40Q96DI7 357 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 DCUN1D1Q96GG9 259 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 LINC00615Q96LM1 132 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 VAT1Q99536 393 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 NRTNQ99748 197 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 FSD1LQ9BXM9 530 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ASF1BQ9NVP2 202 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 C5AR2Q9P296 337 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RSPH14Q9UHP6 348 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 FKBPLQ9UIM3 349 aa13.83□□□□□ -0.2
HLA-DQB2-229ENST00000411527 MYO9AB2RTY4 2548 aa13.82□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
HLA-DQB2-229ENST00000411527 WIPF3A6NGB9 483 aa13.82□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ENO4A6NNW6 628 aa13.82□□□□□ -0.2
HLA-DQB2-229ENST00000411527 C9J4A7 227 aa13.82□□□□□ -0.2
HLA-DQB2-229ENST00000411527 E7EQ34 232 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms