RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OR5T2Q8NGG2 359 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 DNAJA3Q96EY1 480 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PRMT5O14744 637 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 NUAK1O60285 661 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 HEXBP07686 556 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PIM1P11309 404 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 POU2F1P14859 743 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MSX2P35548 267 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OR3A3P47888 321 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OR3A2P47893 321 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CLRN1P58418 232 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CAPSQ13938 189 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 DCBLD1Q8N8Z6 715 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LGR4Q9BXB1 951 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LRMDAQ9H2I8 198 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ANKZF1Q9H8Y5 726 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 RDH8Q9NYR8 311 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PDP1Q9P0J1 537 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TRPS1Q9UHF7 1281 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OR6C75A6NL08 312 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 RGS10O43665 173 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 MAFKO60675 156 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CSTBP04080 98 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ADSSP30520 456 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 RABGGTBP53611 331 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 GPR68Q15743 365 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 THRSPQ92748 146 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ANKHQ9HCJ1 492 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CCNB1IP1Q9NPC3 277 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 HCN2Q9UL51 889 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNS2Q9ULS6 477 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CA14Q9ULX7 337 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 SNX7Q9UNH6 387 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC5A3P53794 718 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PARP15Q460N3 678 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 DENND5AQ6IQ26 1287 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 GPR65Q8IYL9 337 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 APOLD1Q96LR9 279 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 TBC1D17Q9HA65 648 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 DDX20Q9UHI6 824 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 LOC100509620A0A075B734 347 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 NXPE2Q96DL1 559 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 MRM3Q9HC36 420 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ARHGEF4Q9NR80 690 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PPP1R14DQ9NXH3 145 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 UPB1Q9UBR1 384 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 MAU2Q9Y6X3 613 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 A0A0G2JN53 185 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ERCC1P07992 297 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF3P17036 446 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CPN2P22792 545 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 UQCRC1P31930 480 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CDK16Q00536 496 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC34A1Q06495 639 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ST3GAL4Q11206 333 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 RFTN2Q52LD8 501 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CLPTM1LQ96KA5 538 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 NPIPA1Q9UND3 350 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ZSCAN5BA6NJL1 495 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 EPHA3P29320 983 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 GPR107Q5VW38 600 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 GALNT11Q8NCW6 608 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 TTC3P53804 2025 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 MID1O15344 667 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 BNIP3Q12983 259 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 ODF4Q2M2E3 257 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 CERS5Q8N5B7 392 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
PRPF40A-202ENST00000410080 NEMP2A6NFY4 417 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CLDN11O75508 207 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PRKCGP05129 697 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ASMTP46597 345 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 HSPA7P48741 367 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 DGKGP49619 791 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 GCNT1Q02742 428 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PLGLAQ15195 96 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 DLG2Q15700 870 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 UNC93AQ86WB7 457 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 GPALPP1Q8IXQ4 340 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNJ9Q92806 393 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms