RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CLCNKAP51800 687 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 KLHL30Q0D2K2 578 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 NPRL3Q12980 569 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 PPIGQ13427 754 aaKnown RBP eCLIP5.01□□□□□ -1.613e-8■□□□□ 9.9
LSM5-206ENST00000409987 WSCD2Q2TBF2 565 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 KBTBD12Q3ZCT8 623 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 ATP13A5Q4VNC0 1218 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 SLC39A12Q504Y0 691 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 KCNT1Q5JUK3 1230 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 ZBTB44Q8NCP5 570 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 ACVR1CQ8NER5 493 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 PSMA8Q8TAA3 256 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 RBM18Q96H35 190 aaKnown RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 PRAM1Q96QH2 718 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 SMC6Q96SB8 1091 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 CDRT15Q96T59 188 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 PCYT2Q99447 389 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 GFI1Q99684 422 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 CMKLR1Q99788 373 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 TMEM39BQ9GZU3 492 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 SLCO5A1Q9H2Y9 848 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 OLAHQ9NV23 265 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 MCM9Q9NXL9 1143 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 HAO2Q9NYQ3 351 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 C1RLQ9NZP8 487 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 CNIH4Q9P003 139 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 APPL1Q9UKG1 709 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 TMEM184BQ9Y519 407 aaPredicted RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 PCDHGA1Q9Y5H4 931 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 SNX9Q9Y5X1 595 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 BAZ1AQ9NRL2 1556 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 SYNJ2BP-COX16A0A087WUM0 186 aa5□□□□□ -1.61
LSM5-206ENST00000409987 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
LSM5-206ENST00000409987 GOLGA6L9A6NEM1 432 aa5□□□□□ -1.61
LSM5-206ENST00000409987 OOEPA6NGQ2 149 aa5□□□□□ -1.61
LSM5-206ENST00000409987 SLC33A1O00400 549 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 KCNN4O15554 427 aa5□□□□□ -1.61
LSM5-206ENST00000409987 ZNF217O75362 1048 aa5□□□□□ -1.61
LSM5-206ENST00000409987 BCL10O95999 233 aa5□□□□□ -1.61
LSM5-206ENST00000409987 INHBAP08476 426 aa5□□□□□ -1.61
LSM5-206ENST00000409987 IGHV4-30-4P0DP06 118 aa5□□□□□ -1.61
LSM5-206ENST00000409987 PDGFRAP16234 1089 aa5□□□□□ -1.61
LSM5-206ENST00000409987 HRH2P25021 359 aa5□□□□□ -1.61
LSM5-206ENST00000409987 HSPA4P34932 840 aa5□□□□□ -1.61
LSM5-206ENST00000409987 TDO2P48775 406 aa5□□□□□ -1.61
LSM5-206ENST00000409987 TKTL1P51854 596 aa5□□□□□ -1.61
LSM5-206ENST00000409987 LUMP51884 338 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 ZNF132P52740 706 aa5□□□□□ -1.61
LSM5-206ENST00000409987 CLDN20P56880 219 aa5□□□□□ -1.61
LSM5-206ENST00000409987 BRWD1-AS2P59051 145 aa5□□□□□ -1.61
LSM5-206ENST00000409987 ASIC1P78348 528 aa5□□□□□ -1.61
LSM5-206ENST00000409987 HTD2P86397 168 aa5□□□□□ -1.61
LSM5-206ENST00000409987 CRYZQ08257 329 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 DSC1Q08554 894 aa5□□□□□ -1.61
LSM5-206ENST00000409987 MVPQ14764 893 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 OASLQ15646 514 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 SNAPC1Q16533 368 aa5□□□□□ -1.61
LSM5-206ENST00000409987 ANKDD1AQ495B1 522 aa5□□□□□ -1.61
LSM5-206ENST00000409987 CBWD6Q4V339 395 aa5□□□□□ -1.61
LSM5-206ENST00000409987 CBWD3Q5JTY5 395 aa5□□□□□ -1.61
LSM5-206ENST00000409987 EFHC1Q5JVL4 640 aa5□□□□□ -1.61
LSM5-206ENST00000409987 C18orf63Q68DL7 685 aa5□□□□□ -1.61
LSM5-206ENST00000409987 RGMBQ6NW40 437 aa5□□□□□ -1.61
LSM5-206ENST00000409987 BRAT1Q6PJG6 821 aa5□□□□□ -1.61
LSM5-206ENST00000409987 TMEM270Q6UE05 265 aa5□□□□□ -1.61
LSM5-206ENST00000409987 CENPVQ7Z7K6 275 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 LDB1Q86U70 411 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 ADIPOR2Q86V24 386 aa5□□□□□ -1.61
LSM5-206ENST00000409987 FJX1Q86VR8 437 aa5□□□□□ -1.61
LSM5-206ENST00000409987 SAMD14Q8IZD0 417 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 PGBD5Q8N414 524 aa5□□□□□ -1.61
LSM5-206ENST00000409987 SLC38A9Q8NBW4 561 aa5□□□□□ -1.61
LSM5-206ENST00000409987 SPATA18Q8TC71 538 aa5□□□□□ -1.61
LSM5-206ENST00000409987 TRIM44Q96DX7 344 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 ZNF830Q96NB3 372 aaPredicted RBP5□□□□□ -1.61
LSM5-206ENST00000409987 EGFL8Q99944 293 aa5□□□□□ -1.61
LSM5-206ENST00000409987 KRT23Q9C075 422 aa5□□□□□ -1.61
LSM5-206ENST00000409987 SPATC1LQ9H0A9 340 aa5□□□□□ -1.61
LSM5-206ENST00000409987 ABCG8Q9H221 673 aa5□□□□□ -1.61
LSM5-206ENST00000409987 MMP27Q9H306 513 aa5□□□□□ -1.61
LSM5-206ENST00000409987 RAD21L1Q9H4I0 556 aa5□□□□□ -1.61
LSM5-206ENST00000409987 PIH1D3Q9NQM4 214 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 TAS2R14Q9NYV8 317 aa5□□□□□ -1.61
LSM5-206ENST00000409987 TAS2R3Q9NYW6 316 aa5□□□□□ -1.61
LSM5-206ENST00000409987 LARSQ9P2J5 1176 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 RNF7Q9UBF6 113 aa5□□□□□ -1.61
LSM5-206ENST00000409987 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 TSPYL4Q9UJ04 414 aa5□□□□□ -1.61
LSM5-206ENST00000409987 PIN4Q9Y237 131 aaKnown RBP5□□□□□ -1.61
LSM5-206ENST00000409987 B3GALT5Q9Y2C3 310 aa5□□□□□ -1.61
LSM5-206ENST00000409987 LOXL2Q9Y4K0 774 aa5□□□□□ -1.61
LSM5-206ENST00000409987 AP1M2Q9Y6Q5 423 aa5□□□□□ -1.61
LSM5-206ENST00000409987 ARHGEF11O15085 1522 aa5□□□□□ -1.61
LSM5-206ENST00000409987 PDS5BQ9NTI5 1447 aa4.99□□□□□ -1.61
LSM5-206ENST00000409987 CLEC18AA5D8T8 446 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms