RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GLCEO94923 617 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 SPP1P10451 314 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 ITGAMP11215 1152 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 LBPP18428 481 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 ACP1P24666 158 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 SLC6A6P31641 620 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 COL10A1Q03692 680 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 MELKQ14680 651 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 KARSQ15046 597 aaKnown RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 CCDC183Q5T5S1 534 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 FIGLAQ6QHK4 219 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 AFTPHQ6ULP2 937 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 SYVN1Q86TM6 617 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 CCNYQ8ND76 341 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 UBLCP1Q8WVY7 318 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 ASB10Q8WXI3 467 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 SLC25A28Q96A46 364 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 AP2M1Q96CW1 435 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 C14orf79Q96F83 325 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 SPATA33Q96N06 139 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 PANX3Q96QZ0 392 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 THUMPD2Q9BTF0 503 aaKnown RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 LSG1Q9H089 658 aaKnown RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 RIBC2Q9H4K1 309 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 GPN1Q9HCN4 374 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 MKKSQ9NPJ1 570 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 ACSS1Q9NUB1 689 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 ATAD3AQ9NVI7 634 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 CISD1Q9NZ45 108 aaKnown RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 PLEKHB1Q9UF11 243 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 TSPAN16Q9UKR8 245 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 KCNK6Q9Y257 313 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 PLEKHA6Q9Y2H5 1048 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 U3KQV3 271 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 WDR33Q9C0J8 1336 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 TCRBV5S1A1TA0A578 114 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 OVOL3O00110 214 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CTDSPLO15194 276 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 AP5Z1O43299 807 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PPIP5K2O43314 1243 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PLPP2O43688 288 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 SSX4O60224 188 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 SSX5O60225 188 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 HSF2BPO75031 334 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PRDM1O75626 825 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 RGS11O94810 467 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 AK1P00568 194 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 LCATP04180 440 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 MMP3P08254 477 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CD58P19256 250 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PROZP22891 400 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 DNAJB1P25685 340 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PSMB4P28070 264 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 HTR6P50406 440 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 METAP2P50579 478 aaKnown RBP eCLIP4.79□□□□□ -1.64
LSM5-205ENST00000409952 GBX2P52951 348 aaPredicted RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 SNRPEP62304 92 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 POLR2LP62875 67 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 PMP22Q01453 160 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 GCNT1Q02742 428 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PRKCZQ05513 592 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 FAM27E3Q08E93 113 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PMPCAQ10713 525 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 GRIK2Q13002 908 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 SCGB2A2Q13296 93 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 MVPQ14764 893 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 MEP1AQ16819 746 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 ALG10Q5BKT4 473 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 ALG10BQ5I7T1 473 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 LY6G5CQ5SRR4 150 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 STRIP1Q5VSL9 837 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 GGNBP1Q5YKI7 109 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 METTL2BQ6P1Q9 378 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 C15orf52Q6ZUT6 534 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 UNC5CLQ8IV45 518 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 SPATA6LQ8N4H0 392 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 OTUD6BQ8N6M0 293 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 ZNF611Q8N823 705 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 AMER3Q8N944 861 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 BOLLQ8N9W6 283 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 CLEC1AQ8NC01 280 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CMASQ8NFW8 434 aaPredicted RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 TBC1D16Q8TBP0 767 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CHURC1Q8WUH1 139 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 THRSPQ92748 146 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 DTD2Q96FN9 168 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 METTL2AQ96IZ6 378 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 ERP44Q9BS26 406 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CCSER1Q9C0I3 900 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 SLITRK6Q9H5Y7 841 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms