RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ITIH4Q14624 930 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 LINC00303Q3SY05 128 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 PACS1Q6VY07 963 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 ZNF534Q76KX8 674 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 GSTA5Q7RTV2 222 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 NLGN4XQ8N0W4 816 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 PHC3Q8NDX5 983 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 NLGN4YQ8NFZ3 816 aaPredicted RBP17.25■□□□□ 0.35
LSM5-204ENST00000409909 OR4E2Q8NGC2 313 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 SLC41A2Q96JW4 573 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 MAP3K3Q99759 626 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 SLC12A9Q9BXP2 914 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 VPS37BQ9H9H4 285 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 EIF2B3Q9NR50 452 aaKnown RBP17.25■□□□□ 0.35
LSM5-204ENST00000409909 CHRAC1Q9NRG0 131 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 HEBP2Q9Y5Z4 205 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 COLEC10Q9Y6Z7 277 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 LOC101059948A0A1B0GTJ6 334 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 NRDCO43847 1150 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 FOLR1P15328 257 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 MAP4P27816 1152 aaKnown RBP17.24■□□□□ 0.35
LSM5-204ENST00000409909 ARCN1P48444 511 aaKnown RBP17.24■□□□□ 0.35
LSM5-204ENST00000409909 CD151P48509 253 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 SESN2P58004 480 aaPredicted RBP17.24■□□□□ 0.35
LSM5-204ENST00000409909 CRADDP78560 199 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 RPA4Q13156 261 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 KRT33BQ14525 404 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 SEMA3AQ14563 771 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 IL11RAQ14626 422 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 KCNAB1Q14722 419 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
LSM5-204ENST00000409909 AFTPHQ6ULP2 937 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 C4orf22Q6V702 233 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 ZNF843Q8N446 348 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 ZSCAN1Q8NBB4 408 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 OR6P1Q8NGX9 317 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 OR4L1Q8NH43 312 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 UBXN4Q92575 508 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 ELMO2Q96JJ3 720 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 PPM1MQ96MI6 270 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 FERD3LQ96RJ6 166 aa17.24■□□□□ 0.35
LSM5-204ENST00000409909 GSTM1P09488 218 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 FGF5P12034 268 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 NDUFS1P28331 727 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 KPNA2P52292 529 aaKnown RBP17.23■□□□□ 0.35
LSM5-204ENST00000409909 BASP1P80723 227 aaKnown RBP17.23■□□□□ 0.35
LSM5-204ENST00000409909 GSTM4Q03013 218 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 TTC27Q6P3X3 843 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 NAPRTQ6XQN6 538 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 NLRP9Q7RTR0 991 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 OOSP2Q86WS3 158 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 EXD3Q8N9H8 876 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 ACVR1CQ8NER5 493 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 EXTL1Q92935 676 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 MS4A14Q96JA4 679 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 CD180Q99467 661 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 ULBP3Q9BZM4 244 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 HOMER3Q9NSC5 361 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 JRKLQ9Y4A0 524 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 COL6A6A6NMZ7 2263 aa17.23■□□□□ 0.35
LSM5-204ENST00000409909 TLN1Q9Y490 2541 aaKnown RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 TCRBV7S3A2A0A539 114 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 UBA6A0AVT1 1052 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 TLCD2A6NGC4 264 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 IFRD1O00458 451 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 SPAG6O75602 509 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 ITGB2P05107 769 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 EBLN1P0CF75 366 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 POLR2CP19387 275 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 ABHD18Q0P651 414 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 BOP1Q14137 746 aaKnown RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 BRD3Q15059 726 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 TBR1Q16650 682 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 LYPLAL1Q5VWZ2 237 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 FBXO38Q6PIJ6 1188 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 RASGEF1CQ8N431 466 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 SIDT2Q8NBJ9 832 aaKnown RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 PPHLN1Q8NEY8 458 aaKnown RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 LCN9Q8WX39 176 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 TFGQ92734 400 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 PEX13Q92968 403 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 SRMSQ9H3Y6 488 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 MVB12BQ9H7P6 319 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 MARCH4Q9P2E8 410 aaPredicted RBP17.22■□□□□ 0.35
LSM5-204ENST00000409909 IL17BQ9UHF5 180 aa17.22■□□□□ 0.35
LSM5-204ENST00000409909 SLC5A10A0PJK1 596 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 QSOX1O00391 747 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 BTN3A3O00478 584 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 LIN7AO14910 233 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 KIAA0754O94854 1291 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 TIAF1O95411 115 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 FTH1P02794 183 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms