RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GLOD5A6NK44 160 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 NRP1O14786 923 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 EXOC3L2Q2M3D2 409 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ABCA11PQ4W5N1 156 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 AAGABQ6PD74 315 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 POC5Q8NA72 575 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KLRG1Q96E93 195 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 WDR26Q9H7D7 661 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 LRTM1Q9HBL6 345 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PNPOQ9NVS9 261 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TESMINQ9Y4I5 508 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MYH15Q9Y2K3 1946 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 SMIM35A0A1B0GVV1 85 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MYBPHLA2RUH7 354 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TGFBR2P37173 567 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PTGES3Q15185 160 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MAP4K3Q8IVH8 894 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 NXPE1Q8N323 547 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TBATAQ96M53 351 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PLEKHG4BQ96PX9 1271 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KCTD15Q96SI1 283 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GPR174Q9BXC1 333 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 SNX15Q9NRS6 342 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ECHS1P30084 290 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KLHL26Q53HC5 615 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ETNPPLQ8TBG4 499 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 LRRC46Q96FV0 321 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TDRD1Q9BXT4 1180 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KBTBD4Q9NVX7 518 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 SLC24A2Q9UI40 661 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 SPATA31C2B4DYI2 1134 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PDPK1O15530 556 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 DUSP11O75319 330 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CLDN11O75508 207 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GOT2P00505 430 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RHBDL3P58872 404 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PTENP60484 403 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 NKAPLQ5M9Q1 402 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 Q6ZVU0 165 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 OR7A2PQ8NGA2 310 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 JOSD2Q8TAC2 188 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ACTRT1Q8TDG2 376 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 P2RY11Q96G91 374 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TOR3AQ9H497 397 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PDP1Q9P0J1 537 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KCNS2Q9ULS6 477 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NNATQ16517 81 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 DNAJB7Q7Z6W7 309 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ELOA2Q8IYF1 753 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PHOSPHO1Q8TCT1 267 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 POLE3Q9NRF9 147 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PCDHGB5Q9Y5G0 923 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ARID1BQ8NFD5 2236 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 FAM172BPA6NC97 362 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ITGB1P05556 798 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CD53P19397 219 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PRR5P85299 388 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TAB1Q15750 504 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RNASEH2BQ5TBB1 312 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GPR107Q5VW38 600 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 HMGN2P46Q86SG4 172 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CLEC4CQ8WTT0 213 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 KLHL6Q8WZ60 621 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 COMMD4Q9H0A8 199 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MFHAS1Q9Y4C4 1052 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 INSL6Q9Y581 213 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 A0A0U1RQJ8 604 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TCRBV5S4A2TA0A5A2 114 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 HSPA12AO43301 675 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 POP4O95707 220 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RPL3P39023 403 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SMARCB1Q12824 385 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PLGLAQ15195 96 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PLPPR4Q7Z2D5 763 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SYVN1Q86TM6 617 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NXNL1Q96CM4 212 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 IFT27Q9BW83 186 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NKX2-4Q9H2Z4 354 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GLOD4Q9HC38 313 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 LEF1Q9UJU2 399 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NEMP2A6NFY4 417 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TSPAN4O14817 238 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 KCNJ13O60928 360 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CLDN9O95484 217 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PRKAR1AP10644 381 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 KCNJ2P63252 427 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NOMO3P69849 1222 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SPIRE1Q08AE8 756 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 NOMO1Q15155 1222 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms