RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LNPEPQ9UIQ6 1025 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 ZNF148Q9UQR1 794 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 COLEC10Q9Y6Z7 277 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 TLCD2A6NGC4 264 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 ZIC2O95409 532 aaPredicted RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PSMA3P25788 255 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PREPP48147 710 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 NFKB2Q00653 900 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 TUBB3Q13509 450 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 KRT33BQ14525 404 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 ATP1A1-AS1Q5TC04 95 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 FBXO38Q6PIJ6 1188 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 DNAAF3Q8N9W5 541 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 STARD8Q92502 1023 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 ALS2CR12Q96Q35 445 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 FRMD8P1Q9BZ68 369 aaPredicted RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 STARD5Q9NSY2 213 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 SMARCAL1Q9NZC9 954 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PRSS21Q9Y6M0 314 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 UBA6A0AVT1 1052 aaPredicted RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 CCDC162PA2VCL2 907 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PYCARD-AS1I3L0S3 204 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 ARHGAP6O43182 974 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 POLR2CP19387 275 aaPredicted RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 OAS2P29728 719 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 KPNA2P52292 529 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 CDH17Q12864 832 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 SKIDA1Q1XH10 827 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PWWP2BQ6NUJ5 590 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PHC3Q8NDX5 983 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 OR13J1Q8NGT2 312 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 STAMBPL1Q96FJ0 436 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 CD180Q99467 661 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 EFHD1Q9BUP0 239 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 PDE7BQ9NP56 450 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 LZTFL1Q9NQ48 299 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC2A6Q9UGQ3 507 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 CROTQ9UKG9 612 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 HEBP2Q9Y5Z4 205 aa18.78■□□□□ 0.6
SMARCB1-204ENST00000407422 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 ERI2A8K979 691 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 SUN1O94901 812 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 DLSTP36957 453 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 FDFT1P37268 417 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 ARL4DP49703 201 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 POLE2P56282 527 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 HSD11B2P80365 405 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 CDC20Q12834 499 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 SIX1Q15475 284 aaPredicted RBP18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 ACVR1CQ8NER5 493 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 ZNF778Q96MU6 729 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 VPS37BQ9H9H4 285 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 RAB6BQ9NRW1 208 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 GEMIN8Q9NWZ8 242 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 RARRES3Q9UL19 164 aa18.77■□□□□ 0.6
SMARCB1-204ENST00000407422 E7EVH7 732 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 J3QKU1 62 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 TERTO14746 1132 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 ZSCAN5DPP0CG00 497 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 NDUFS1P28331 727 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 FOXN2P32314 431 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 LMAN1P49257 510 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 ARMC6Q6NXE6 501 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 C16orf46Q6P387 395 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 PPP1R21Q6ZMI0 780 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 KMT5CQ86Y97 462 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 D2HGDHQ8N465 521 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 LCN9Q8WX39 176 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 HDAC10Q969S8 669 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 CATSPER2Q96P56 530 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 FGF21Q9NSA1 209 aa18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 SETXQ7Z333 2677 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 SPENQ96T58 3664 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-204ENST00000407422 FLNBO75369 2602 aaKnown RBP18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 IFRD1O00458 451 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 SLC28A2O43868 658 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 NTRK1P04629 796 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 SFTPCP11686 197 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 NSG1P42857 185 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 ACY1Q03154 408 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 SEMA5AQ13591 1074 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 GPR19Q15760 415 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 KCTD19Q17RG1 926 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 NAPRTQ6XQN6 538 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 PRICKLE2Q7Z3G6 844 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 FAM117AQ9C073 453 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 SRMSQ9H3Y6 488 aa18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 AKIRIN1Q9H9L7 192 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-204ENST00000407422 HEATR9A2RTY3 570 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 OR1I1O60431 355 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 AP2A2O94973 939 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 ZBTB11O95625 1053 aaPredicted RBP18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 GAS8O95995 478 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 APRTP07741 180 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TCN2P20062 427 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 CCR10P46092 362 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms