RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SUN2Q9UH99 717 aa24.2■■□□□ 1.46
DNMT3A-206ENST00000406659 ST14Q9Y5Y6 855 aa24.2■■□□□ 1.46
DNMT3A-206ENST00000406659 C2orf16Q68DN1 1984 aa24.2■■□□□ 1.46
DNMT3A-206ENST00000406659 PABPN1LA6NDY0 278 aaKnown RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 FTH1P02794 183 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 ENO2P09104 434 aaPredicted RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 HLA-EP13747 358 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 EIF4HQ15056 248 aaKnown RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 HNRNPA1L2Q32P51 320 aaKnown RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 ATP6AP1LQ52LC2 224 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 LDLRAP1Q5SW96 308 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 SERPINA13PQ6UXR4 307 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 NRSN1Q8IZ57 195 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 BTN2A2Q8WVV5 523 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 ROPN1LQ96C74 230 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 ZNF570Q96NI8 536 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 CDCA3Q99618 268 aaPredicted RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 PARVBQ9HBI1 364 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 PDE10AQ9Y233 779 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 FADS2P1A8MWK0 482 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 E7ENX8 843 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 SYNCRIPO60506 623 aaKnown RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 STK16O75716 305 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 MRPL19P49406 292 aaKnown RBP24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 GRIK2Q13002 908 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 GRIN2CQ14957 1233 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 C6orf136Q5SQH8 315 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 MBOAT1Q6ZNC8 495 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 KBTBD6Q86V97 674 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 TMIEQ8NEW7 156 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 ELMO1Q92556 727 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 SLC12A9Q9BXP2 914 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 NKX2-4Q9H2Z4 354 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 TRPV4Q9HBA0 871 aa24.19■■□□□ 1.46
DNMT3A-206ENST00000406659 PLXNA2O75051 1894 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 QSOX1O00391 747 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 WNT9AO14904 365 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 ANGPT2O15123 496 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 HIST1H2AGP0C0S8 130 aaPredicted RBP24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 EPB42P16452 691 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 HIST1H2ADP20671 130 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 MSX2P35548 267 aaPredicted RBP24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 PIK3CGP48736 1102 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 HTR6P50406 440 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 ATG2AQ2TAZ0 1938 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 VPS26BQ4G0F5 336 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 C9orf64Q5T6V5 341 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 TLDC1Q6P9B6 456 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 TTC23LQ6PF05 361 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 GPR149Q86SP6 731 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 FNDC5Q8NAU1 212 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 ASB11Q8WXH4 323 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 AP2M1Q96CW1 435 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 HIST1H2AHQ96KK5 128 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 HIST1H2AJQ99878 128 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 H2AFJQ9BTM1 129 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 WRAP53Q9BUR4 548 aaKnown RBP24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 SPAG4Q9NPE6 437 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 ITM2BQ9Y287 266 aa24.18■■□□□ 1.46
DNMT3A-206ENST00000406659 PSMD11O00231 422 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 MAGEA10P43363 369 aaPredicted RBP24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 PSMD8P48556 350 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 CDKL1Q00532 357 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 CREB5Q02930 508 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 ZNF648Q5T619 568 aaPredicted RBP24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 TANGO2Q6ICL3 276 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 Q6ZSR9 355 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 VRK3Q8IV63 474 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 TCAIMQ8N3R3 496 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 PIP4K2CQ8TBX8 421 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 GLYATL1Q969I3 302 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 NAF1Q96HR8 494 aaKnown RBP24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 VPS35Q96QK1 796 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 C1orf50Q9BV19 199 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 HPS4Q9NQG7 708 aa24.17■■□□□ 1.46
DNMT3A-206ENST00000406659 SLC16A5O15375 505 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 ITGB7P26010 798 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 MS4A2Q01362 244 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 ZNF234Q14588 700 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 PDCD4Q53EL6 469 aaKnown RBP24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 PPP2R2DQ66LE6 453 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 FBXL19Q6PCT2 694 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 BLOC1S3Q6QNY0 202 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 RAVER1Q8IY67 606 aaKnown RBP24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 SFRP1Q8N474 314 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 TSPEARQ8WU66 669 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 ASZ1Q8WWH4 475 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 NTMT1Q9BV86 223 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 BRINP2Q9C0B6 783 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 ZFP14Q9HCL3 533 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 SGTAO43765 313 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 BCAS2O75934 225 aaPredicted RBP24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 TCN1P20061 433 aaPredicted RBP24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 CAPN3P20807 821 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 CYP2A7P20853 494 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 FCARP24071 287 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 KCNK10P57789 538 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 SP140Q13342 867 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 NR6A1Q15406 480 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 NEK10Q6ZWH5 1172 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms