RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TXNDC11Q6PKC3 985 aa16■□□□□ 0.15
LSP1-204ENST00000406638 FAM83FQ8NEG4 500 aaPredicted RBP16■□□□□ 0.15
LSP1-204ENST00000406638 RORBQ92753 470 aa16■□□□□ 0.15
LSP1-204ENST00000406638 AURKBQ96GD4 344 aaPredicted RBP16■□□□□ 0.15
LSP1-204ENST00000406638 UBXN10Q96LJ8 280 aa16■□□□□ 0.15
LSP1-204ENST00000406638 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
LSP1-204ENST00000406638 TRIM54Q9BYV2 358 aa16■□□□□ 0.15
LSP1-204ENST00000406638 ELAC1Q9H777 363 aaKnown RBP16■□□□□ 0.15
LSP1-204ENST00000406638 MID1IP1Q9NPA3 183 aa16■□□□□ 0.15
LSP1-204ENST00000406638 CARD8Q9Y2G2 431 aa16■□□□□ 0.15
LSP1-204ENST00000406638 SHROOM3Q8TF72 1996 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 ASPDHA6ND91 283 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 M0QX08 132 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 SIX3O95343 332 aaPredicted RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 LTA4HP09960 611 aaKnown RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 IMPDH1P20839 514 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 PRKACGP22612 351 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 GTF2E2P29084 291 aaKnown RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 SPATC1Q76KD6 591 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 P2RY8Q86VZ1 359 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 DCP2Q8IU60 420 aaKnown RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 CLYBLQ8N0X4 340 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 TRIM43Q96BQ3 446 aaPredicted RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 NSMCE2Q96MF7 247 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 SEPT5Q99719 369 aaPredicted RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 ASPSCR1Q9BZE9 553 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 SLIRPQ9GZT3 109 aaKnown RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 SIK2Q9H0K1 926 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 ATXN3LQ9H3M9 355 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 SLC52A3Q9NQ40 469 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 ERVK-18Q9QC07 812 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 FBXO5Q9UKT4 447 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 UBXN8O00124 270 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 KRT8P05787 483 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 PSMB9P28065 219 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 UNC50Q53HI1 259 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 ZNF678Q5SXM1 525 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 NAPEPLDQ6IQ20 393 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 RFPL4BQ6ZWI9 263 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 IPMKQ8NFU5 416 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 GIPC2Q8TF65 315 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 TWIST2Q8WVJ9 160 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 YME1L1Q96TA2 773 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 NECTIN3Q9NQS3 549 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 SDR39U1Q9NRG7 319 aaPredicted RBP15.99■□□□□ 0.15
LSP1-204ENST00000406638 UGT2A1Q9Y4X1 527 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 PTPRDP23468 1912 aa15.99■□□□□ 0.15
LSP1-204ENST00000406638 GABARAPL2P60520 117 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 POU4F1Q01851 419 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 DUSP4Q13115 394 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 PCID2Q5JVF3 399 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 LINC00299Q6ZSB3 139 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 FAM86B1Q8N7N1 296 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 MCFD2Q8NI22 146 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 PHF10Q8WUB8 498 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 AUTS2Q8WXX7 1259 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 RNF34Q969K3 372 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 TUBB1Q9H4B7 451 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 FBXW11Q9UKB1 542 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 INVSQ9Y283 1065 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 BOLA1Q9Y3E2 137 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 N6AMT1Q9Y5N5 214 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 CHD7Q9P2D1 2997 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 A0A1W2PP18 115 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 MOCS2O96007 188 aaPredicted RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 CLK3P49761 638 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 ISL1P61371 349 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 MRPL58Q14197 206 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 BEND5Q7L4P6 421 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 CNTN4Q8IWV2 1026 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 RYBPQ8N488 228 aaPredicted RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 MCOLN3Q8TDD5 553 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 FRS2Q8WU20 508 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 FIG4Q92562 907 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 CELF6Q96J87 481 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 NSUN5Q96P11 429 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 WDCPQ9H6R7 721 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 DYTNA2CJ06 578 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 CDK14O94921 469 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 RBP1P09455 135 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 KCNK10P57789 538 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 CRY1Q16526 586 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 GPR158Q5T848 1215 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 PHYKPLQ8IUZ5 450 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 SH3RF2Q8TEC5 729 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 MUC13Q9H3R2 512 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 DDX28Q9NUL7 540 aaKnown RBP15.98■□□□□ 0.15
LSP1-204ENST00000406638 UTS2RQ9UKP6 389 aa15.98■□□□□ 0.15
LSP1-204ENST00000406638 MTMR11A4FU01 709 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 C1RP00736 705 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 PRKCAP17252 672 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 LBPP18428 481 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 ITGB6P18564 788 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 LBX1P52954 281 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 PLIN5Q00G26 463 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 GALNT1Q10472 559 aaPredicted RBP15.97■□□□□ 0.15
LSP1-204ENST00000406638 FBXO48Q5FWF7 155 aa15.97■□□□□ 0.15
LSP1-204ENST00000406638 HABP4Q5JVS0 413 aaKnown RBP15.97■□□□□ 0.15
LSP1-204ENST00000406638 SULT1C3Q6IMI6 304 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms