RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 RIPOR3Q96MK2 946 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 EBPLQ9BY08 206 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 NOL4O94818 638 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TACSTD2P09758 323 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SELPP16109 830 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 NSG1P42857 185 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 MARCKSL1P49006 195 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CCR8P51685 355 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 KAT2AQ92830 837 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SMPD3Q9NY59 655 aaPredicted RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CDH22Q9UJ99 828 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 UBIAD1Q9Y5Z9 338 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZFP37Q9Y6Q3 630 aaPredicted RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SYN3O14994 580 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 PRAMEF12O95522 483 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 MPSTP25325 297 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TMEM17Q86X19 198 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 LIX1Q8N485 282 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 HDDC3Q8N4P3 179 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SLC44A1Q8WWI5 657 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CIB1Q99828 191 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 NKIRAS2Q9NYR9 191 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF282Q9UDV7 671 aaPredicted RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 RBM47A0AV96 593 aaKnown RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 MAGEB17A8MXT2 336 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 HSPA7P48741 367 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZMIZ2Q8NF64 920 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SMPDL3BQ92485 455 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 BAIAP2Q9UQB8 552 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 FKBP7Q9Y680 259 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF726A6NNF4 738 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 PRR5-ARHGAP8B1AHC4 643 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 NUAK1O60285 661 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TM7SF2O76062 418 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GPIP06744 558 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CCNFP41002 786 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TAS2R40P59535 323 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TAS2R50P59544 299 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ARHGAP8P85298 464 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 REP15Q6BDI9 236 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 USP30Q70CQ3 517 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 PGAM4Q8N0Y7 254 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GPR21Q99679 349 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 MED11Q9P086 117 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GRIN2DO15399 1336 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SGCBQ16585 318 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TMEM164Q5U3C3 297 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 HID1Q8IV36 788 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 PDPRQ8NCN5 879 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 EPHB6O15197 1021 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ALOX15BO15296 676 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GNAZP19086 355 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SLC7A1P30825 629 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 NDST2P52849 883 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 TMEM44Q2T9K0 475 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 LINGO2Q7L985 606 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 ECHDC2Q86YB7 292 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SDR16C5Q8N3Y7 309 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 OR5B17Q8NGF7 314 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 CPNE2Q96FN4 548 aaPredicted RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 FAM124BQ9H5Z6 455 aaPredicted RBP11.88□□□□□ -0.51
SMCR8-201ENST00000406438 SP140LQ9H930 580 aa11.88□□□□□ -0.51
SMCR8-201ENST00000406438 GJB1P08034 283 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 RHOQP17081 205 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 DRD4P21917 467 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 NR4A1P22736 598 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
SMCR8-201ENST00000406438 GLIS3Q8NEA6 775 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
SMCR8-201ENST00000406438 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
SMCR8-201ENST00000406438 RPS9P46781 194 aaKnown RBP11.87□□□□□ -0.51
SMCR8-201ENST00000406438 RGMBQ6NW40 437 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 GSTCDQ8NEC7 633 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 NXPE2Q96DL1 559 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 B3GNT5Q9BYG0 378 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 TLL2Q9Y6L7 1015 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 CLCA3PQ9Y6N3 262 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 PDPK1O15530 556 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 CPNE3O75131 537 aaKnown RBP11.87□□□□□ -0.51
SMCR8-201ENST00000406438 RLN2P04090 185 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF20P17024 532 aa11.87□□□□□ -0.51
SMCR8-201ENST00000406438 FSTL1Q12841 308 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms