RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TBX4P57082 545 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SPIBQ01892 262 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CXCL9Q07325 125 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GALNT2Q10471 571 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 COX10Q12887 443 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 USP41Q3LFD5 358 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 OR2T5Q6IEZ7 315 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 TRNP1Q6NT89 227 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PAQR3Q6TCH7 311 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 AFTPHQ6ULP2 937 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PTCHD4Q6ZW05 846 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 OR6Q1Q8NGQ2 317 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 OR2T29Q8NH02 315 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 NTAN1Q96AB6 310 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CNDP2Q96KP4 475 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SERPINB11Q96P15 392 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 TRNT1Q96Q11 434 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CDK15Q96Q40 435 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GPR20Q99678 358 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 KATNAL1Q9BW62 490 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 TFB2MQ9H5Q4 396 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SCUBE2Q9NQ36 999 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 C1orf109Q9NX04 203 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 IRS2Q9Y4H2 1338 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SYNDIG1LA6NDD5 238 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 LRRC14BA6NHZ5 514 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SNTNA6NMZ2 147 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TSPAN4O14817 238 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PPEF2O14830 753 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SH3BGRLO75368 114 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 RPP40O75818 363 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 AP2A2O94973 939 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 GOT2P00505 430 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 THP07101 528 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PKMP14618 531 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF7P17097 686 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ITGALP20701 1170 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 GPX3P22352 226 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CHI3L1P36222 383 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TTPAP49638 278 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SPDYE7PQ495Y7 208 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TREML2Q5T2D2 321 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PRR23CQ6ZRP0 262 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 HFE2Q6ZVN8 426 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CYP4V2Q6ZWL3 525 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CLEC14AQ86T13 490 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 AMIGO3Q86WK7 504 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 HASPINQ8TF76 798 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 NELL1Q92832 810 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TMEM125Q96AQ2 219 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SMAD5Q99717 465 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 BCL7BQ9BQE9 202 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 IPPKQ9H8X2 491 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 UBA2Q9UBT2 640 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 STOML2Q9UJZ1 356 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 FZD1Q9UP38 647 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 HSPB11Q9Y547 144 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PCDHGA3Q9Y5H0 932 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 A0A1B0GW55 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 GUCY1B2O75343 617 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CREG1O75629 220 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SEC14L2O76054 403 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CTSHP09668 335 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L2P0CJ85 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L3P0CJ86 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L4P0CJ87 422 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L5P0CJ88 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L6P0CJ89 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4L7P0CJ90 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 KCNA5P22460 613 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DAOAP59103 153 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SH3BP2P78314 561 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ACSM2AQ08AH3 577 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 STARD3Q14849 445 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 WDR45BQ5MNZ6 344 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ACSM2BQ68CK6 577 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CATSPERGQ6ZRH7 1159 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SPRED1Q7Z699 444 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 HS3ST5Q8IZT8 346 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TMEM130Q8N3G9 435 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CHDHQ8NE62 594 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PHF10Q8WUB8 498 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DHRS1Q96LJ7 313 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF641Q96N77 438 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 NPY6RQ99463 290 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CTRCQ99895 268 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SERHL2Q9H4I8 314 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SERHLQ9NQF3 203 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 TLR8Q9NR97 1041 aaKnown RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 H2AFY2Q9P0M6 372 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-202ENST00000405010 DUX4Q9UBX2 424 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 LYVE1Q9Y5Y7 322 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 USP54Q70EL1 1684 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 CITO14578 2027 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 PDE4DIPQ5VU43 2346 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
HDAC9-202ENST00000405010 SLC12A8A0AV02 714 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms