RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GPRC6AQ5T6X5 926 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 C1orf189Q5VU69 101 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MLIPQ5VWP3 458 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IGFL2Q6UWQ7 119 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 DAAM2Q86T65 1068 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 RAB43Q86YS6 212 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZNF295-AS1Q8N0V1 137 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZADH2Q8N4Q0 377 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ITLN2Q8WWU7 325 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 C12orf66Q96MD2 445 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GBP5Q96PP8 586 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MESP1Q9BRJ9 268 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PITPNM3Q9BZ71 974 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SPRTNQ9H040 489 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 THAP2Q9H0W7 228 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NUP62CLQ9H1M0 184 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PTRH2Q9Y3E5 179 aaKnown RBP11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 AKAP6Q13023 2319 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 BTN3A1O00481 513 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SNRPB2P08579 225 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MSL3P1P0C860 447 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 VCLP18206 1134 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ITGAXP20702 1163 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CYP2A7P20853 494 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CDH3P22223 829 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ITGA3P26006 1051 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PRDX3P30048 256 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GJC1P36383 396 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CHRNA4P43681 627 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 XRCC4Q13426 336 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC9A5Q14940 896 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ASIC2Q16515 512 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF324BQ6AW86 544 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MRPL14Q6P1L8 145 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FAM151BQ6UXP7 276 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DET1Q7L5Y6 550 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CARFQ8N187 725 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PLD5Q8N7P1 536 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CCNYQ8ND76 341 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DDHD1Q8NEL9 900 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FAR1Q8WVX9 515 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RAPGEF5Q92565 580 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AGAP3Q96P47 875 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 WDR77Q9BQA1 342 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TRIM8Q9BZR9 551 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MRPL47Q9HD33 250 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RAD18Q9NS91 495 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 UBP1Q9NZI7 540 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 IL17CQ9P0M4 197 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 COPG2Q9UBF2 871 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FAM8A1Q9UBU6 413 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MYO6Q9UM54 1294 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FBN3Q75N90 2809 aa11.52□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KCNJ13O60928 360 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 WISP2O76076 250 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NDST3O95803 873 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TPM2P07951 284 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MYBL1P10243 752 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 EDN3P14138 238 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HLA-DPA1P20036 260 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CD68P34810 354 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HADHAP40939 763 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TDGF1P3P51864 188 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KCNK10P57789 538 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GTF2H3Q13889 308 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NAA30Q147X3 362 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZXDCQ2QGD7 858 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DEFB110Q30KQ9 67 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KRTAP21-3Q3LHN1 58 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FNBP1LQ5T0N5 605 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CLEC1AQ8NC01 280 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CATSPER1Q8NEC5 780 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR2Y1Q8NGV0 311 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZFPM2Q8WW38 1151 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RELTQ969Z4 430 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF670Q9BS34 389 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DHRS4Q9BTZ2 278 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC25A51Q9H1U9 297 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CBX8Q9HC52 389 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC6A20Q9NP91 592 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AGPAT4Q9NRZ5 378 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms