RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 C6orf132Q5T0Z8 1188 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 CAPRIN2Q6IMN6 1127 aaKnown RBP15.6■□□□□ 0.09
HMGA1-204ENST00000401473 GPR156Q8NFN8 814 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 NETO1Q8TDF5 533 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 INSM2Q96T92 566 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-204ENST00000401473 TSSK1BQ9BXA7 367 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 WWP1Q9H0M0 922 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 ZNF624Q9P2J8 865 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-204ENST00000401473 ZNF180Q9UJW8 692 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 KNTC1P50748 2209 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 LY6G6EA0A0G2JKS1 128 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 PDZK1P1A8MUH7 402 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 B4DGG1 531 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 KPNA5O15131 536 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 ALDOAP04075 364 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 APOA4P06727 396 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 ACADLP28330 430 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 GMPRP36959 345 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SKIV2L2P42285 1042 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLCO1A2P46721 670 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 POU4F1Q01851 419 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 RPA4Q13156 261 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 USP10Q14694 798 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 PLEKHS1Q5SXH7 462 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CYHR1Q6ZMK1 362 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CMC1Q7Z7K0 106 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 C17orf82Q86X59 251 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLC35F3Q8IY50 421 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLC22A15Q8IZD6 547 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SFRP1Q8N474 314 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 ZBTB2Q8N680 514 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 EPS8L3Q8TE67 593 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 EEF1AKMT1Q8WVE0 214 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 INPP5DQ92835 1189 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 TMEM159Q96B96 161 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 ZBTB9Q96C00 473 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CCDC77Q9BR77 488 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 DUSP23Q9BVJ7 150 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 EURLQ9NYK6 297 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 PLAAQ9Y263 795 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 IKBKGQ9Y6K9 419 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 U3KQA8 63 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CBFA2T3O75081 653 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 TCEA3O75764 348 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLC19A1P41440 591 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 GRK6P43250 576 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CSRP3P50461 194 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 AGAP9Q5VTM2 703 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 CPNE9Q8IYJ1 553 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 RHBDD1Q8TEB9 315 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLC37A2Q8TED4 501 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SETD7Q8WTS6 366 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 ANKRD49Q8WVL7 239 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 APOLD1Q96LR9 279 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 RMDN2Q96LZ7 410 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 KLHL42Q9P2K6 505 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 TBK1Q9UHD2 729 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 SLC24A2Q9UI40 661 aa15.59■□□□□ 0.09
HMGA1-204ENST00000401473 TSR3Q9UJK0 312 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 RUVBL2Q9Y230 463 aaKnown RBP15.59■□□□□ 0.09
HMGA1-204ENST00000401473 FOXO6A8MYZ6 492 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 FLRT2O43155 660 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 PHGDHO43175 533 aaKnown RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 WISP3O95389 354 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 TSPAN12O95859 305 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 MAZP56270 477 aaKnown RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 ZKSCAN8Q15776 578 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 RPE65Q16518 533 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 RSPO4Q2I0M5 234 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 SYTL3Q4VX76 610 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 ZCCHC8Q6NZY4 707 aaKnown RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 PIP4P1Q86T03 277 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 CYP4X1Q8N118 509 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 ARL14Q8N4G2 192 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 FAM181AQ8N9Y4 354 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 PHC3Q8NDX5 983 aa15.58■□□□□ 0.08
HMGA1-204ENST00000401473 TRMT6Q9UJA5 497 aaKnown RBP15.58■□□□□ 0.08
HMGA1-204ENST00000401473 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PPM1DO15297 605 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 STMN1P16949 149 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PLOD1Q02809 727 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 ABRQ12979 859 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PPM1JQ5JR12 505 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 UGT3A1Q6NUS8 523 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 NAXDQ8IW45 347 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 KYQ8NBH2 561 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 TFGQ92734 400 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 GLMNQ92990 594 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 C12orf66Q96MD2 445 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 GPAMQ9HCL2 828 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 SLC30A4O14863 429 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 UQCRHP07919 91 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 SLC35G4P0C7Q5 338 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 ALPPL2P10696 532 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 ZNF37AP17032 561 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 XRCC1P18887 633 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms