RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 BCKDKO14874 412 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 AKAP8O43823 692 aaKnown RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 NR2F6P10588 404 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TYRP1P17643 537 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ATP6V0D1P61421 351 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 SWI5Q1ZZU3 235 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TXNDC8Q6A555 127 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 HFE2Q6ZVN8 426 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 OR2AJ1Q8NGZ0 328 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 DLG3Q92796 817 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 MMADHCQ9H3L0 296 aaPredicted RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 PRNPP04156 253 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CCL5P13501 91 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 KIR3DL1P43629 444 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TSPAN5P62079 268 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 HTRA3P83110 453 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ZACNQ401N2 412 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 PARP15Q460N3 678 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 BRMS1LQ5PSV4 323 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 LMX1AQ8TE12 382 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CCDC120Q96HB5 630 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TCF12Q99081 682 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 MOCS1Q9NZB8 636 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TBC1D14Q9P2M4 693 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TOR1BO14657 336 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 B3GALT2O43825 422 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 PGAM2P15259 253 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 ZNF567Q8N184 647 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 SH3RF2Q8TEC5 729 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 OVCA2Q8WZ82 227 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 HEPHQ9BQS7 1158 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 IFT27Q9BW83 186 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ZNF536O15090 1300 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 FSHRP23945 695 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CDK9P50750 372 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 ALDH3A2P51648 485 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 LRRC32Q14392 662 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 IDNKQ5T6J7 187 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 AMIGO1Q86WK6 493 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CPSF7Q8N684 471 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 GBA3Q9H227 469 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 UCKL1Q9NWZ5 548 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 IRS2Q9Y4H2 1338 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TBX1O43435 398 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 ZNF823P16415 610 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 BMP6P22004 513 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 CLCQ05315 142 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ELP6Q0PNE2 266 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 DOK4Q8TEW6 326 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 HIST1H2AAQ96QV6 131 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 IL36AQ9UHA7 158 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 PIP5K1BO14986 540 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 STK16O75716 305 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ACADLP28330 430 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ACTR1BP42025 376 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 ACTR1AP61163 376 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 ID2Q02363 134 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 METTL3Q86U44 580 aaKnown RBP13.57□□□□□ -0.24
VAPA-202ENST00000400000 TMEM192Q8IY95 271 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TMEM145Q8NBT3 493 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 FAM13CQ8NE31 585 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 TVP23BQ9NYZ1 205 aa13.57□□□□□ -0.24
VAPA-202ENST00000400000 SMIM30A4D0T7 59 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PLSCR1O15162 318 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 DHX15O43143 795 aaKnown RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 LPAL2Q16609 132 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 SPDYCQ5MJ68 293 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ALG3Q92685 438 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 FEM1AQ9BSK4 669 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 COL20A1Q9P218 1284 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ING4Q9UNL4 249 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 A0A0X1KG70 313 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 BTN3A2P78410 334 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 SLC1A5Q15758 541 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 MEA1Q16626 185 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PDK4Q16654 411 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 LRTOMTQ8WZ04 291 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 MKL1Q969V6 931 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 TTC34A8MYJ7 566 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 NDUFS4O43181 175 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 B4GALT2O60909 372 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ZNF16P17020 682 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms