RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SMPDL3AQ92484 453 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 CMTM7Q96FZ5 175 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RNF145Q96MT1 663 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 PRRX2Q99811 253 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ACTL8Q9H568 366 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TMEM248Q9NWD8 314 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 DNMT3AQ9Y6K1 912 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 FAM237AA0A1B0GTK4 181 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 MUSKO15146 869 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 OR10H3O60404 316 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SLC26A3P40879 764 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SP140Q13342 867 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 DECR1Q16698 335 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 LRRC36Q1X8D7 754 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GCNT7Q6ZNI0 430 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 NSMCE3Q96MG7 304 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GSTK1Q9Y2Q3 226 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RAP2CQ9Y3L5 183 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 A0A1W2PP55 124 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 DUXAA6NLW8 204 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 CCT8L1PA6NM43 557 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TTLL8A6PVC2 850 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TRIM3O75382 744 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 TCEA1P23193 301 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 TARSP26639 723 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 MAGEA9P43362 315 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TOR1AIP1Q5JTV8 583 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RASSF6Q6ZTQ3 369 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 OR4E2Q8NGC2 313 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ZNF671Q8TAW3 534 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 BAP1Q92560 729 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SLC35G5Q96KT7 338 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 NOL6Q9H6R4 1146 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 RMI1Q9H9A7 625 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 PLEKHA1Q9HB21 404 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 DNAJB4Q9UDY4 337 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GLS2Q9UI32 602 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 AP4S1Q9Y587 144 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 MYADML2A6NDP7 307 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 C2CD4BA6NLJ0 364 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 BBIP1A8MTZ0 92 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 FOXD2O60548 495 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 TBX18O95935 607 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PREPP48147 710 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CST6Q15828 149 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ARMCX4Q5H9R4 360 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 MANEAQ5SRI9 462 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ARL14Q8N4G2 192 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 KREMEN1Q96MU8 473 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 EPYCQ99645 322 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 HDHD2Q9H0R4 259 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TELO2Q9Y4R8 837 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 RGS5O15539 181 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 BTN3A2P78410 334 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TOP3AQ13472 1001 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 FBXL22Q6P050 247 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 RALGPS2Q86X27 583 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 ZDHHC13Q8IUH4 622 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 UBE2J2Q8N2K1 259 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 C4orf32Q8N8J7 132 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CENPIQ92674 756 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 ABTB1Q969K4 478 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 MTERF3Q96E29 417 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PTPN18Q99952 460 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 MVB12BQ9H7P6 319 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 MINDY3Q9H8M7 445 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SNED1Q8TER0 1413 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 EFCAB10A6NFE3 127 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 A8MUA0 341 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZNF623O75123 536 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SLC22A3O75751 556 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CD247P20963 164 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CXCR1P25024 350 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 GABRB2P47870 512 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 NCBP2P52298 156 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP47-203ENST00000399455 FUT2Q10981 343 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 BNIP2Q12982 314 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CHIT1Q13231 466 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ELAVL3Q14576 367 aaKnown RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 LRRC70Q7Z2Q7 622 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 EXOC3L1Q86VI1 746 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TMPRSS6Q8IU80 811 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 GPR151Q8TDV0 419 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZDHHC1Q8WTX9 485 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 OXNAD1Q96HP4 312 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 TEKT5Q96M29 485 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 GPER1Q99527 375 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 KLHL25Q9H0H3 589 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 XPNPEP1Q9NQW7 623 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SNX10Q9Y5X0 201 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 DDX60Q8IY21 1712 aaKnown RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 DCLK1O15075 740 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZNF208O43345 1280 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 RENP00797 406 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZSCAN5DPP0CG00 497 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SAGP10523 405 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 PTPN5P54829 565 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TAS2R40P59535 323 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms