RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 OLFML1Q6UWY5 402 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 GALNT7Q86SF2 657 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 KBTBD2Q8IY47 623 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 GPR88Q9GZN0 384 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 IGFLR1Q9H665 355 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SP140LQ9H930 580 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 HHATLQ9HCP6 504 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 OXSMQ9NWU1 459 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RAB23Q9ULC3 237 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 C10orf71Q711Q0 1435 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 H0Y858 1186 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 BUD23O43709 281 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PPP1R11O60927 126 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SH3BGRLO75368 114 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RENP00797 406 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TSPAN8P19075 237 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 DNAJA1P31689 397 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CRISP3P54108 245 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RPS14P62263 151 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 LSM3P62310 102 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CAMK1Q14012 370 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PDCD4Q53EL6 469 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 C10orf62Q5T681 223 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 EGFLAMQ63HQ2 1017 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 FRMD7Q6ZUT3 714 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 KCTD8Q6ZWB6 473 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 ERI1Q8IV48 349 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 METTL21AQ8WXB1 218 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC22A18Q96BI1 424 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CEP295NLQ96MC4 621 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PWWP2AQ96N64 755 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 KLHL32Q96NJ5 620 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MND1Q9BWT6 205 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PIP5K1BO14986 540 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 KMOO15229 486 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 GADD45GO95257 159 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 H6PDO95479 791 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 HMGN1P05114 100 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TACSTD2P09758 323 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CLCN4P51793 760 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PPIGQ13427 754 aaKnown RBP eCLIP8.24□□□□□ -1.097e-7■■■□□ 14.6
SPTLC3-201ENST00000399002 CHADLQ6NUI6 762 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MSANTD2Q6P1R3 559 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SCIMPQ6UWF3 145 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TAC4Q86UU9 113 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 GPR135Q8IZ08 494 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 FITM2Q8N6M3 262 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 LRTOMTQ8WZ04 291 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 DNASE1L2Q92874 299 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 KLHL5Q96PQ7 755 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TMEM209Q96SK2 561 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CADM1Q9BY67 442 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 WDR55Q9H6Y2 383 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 IFT46Q9NQC8 304 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CHRAC1Q9NRG0 131 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CAPN8A6NHC0 703 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 LRRC72A6NJI9 287 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PI15O43692 258 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TLX3O43711 291 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RSL1D1O76021 490 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PRAMEF12O95522 483 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 VIPP01282 170 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 NR2C1P13056 603 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PRPS1L1P21108 318 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 NMBRP28336 390 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 ARCN1P48444 511 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 NOGQ13253 232 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 VANGL1Q8TAA9 524 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CPNE2Q96FN4 548 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CYP2S1Q96SQ9 504 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MAPKAP1Q9BPZ7 522 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RNF208Q9H0X6 261 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 STOX2Q9P2F5 926 aaPredicted RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MRPS7Q9Y2R9 242 aaKnown RBP8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 HES2Q9Y543 173 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 K7EPI3 171 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 C8BP07358 591 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PTPN2P17706 415 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 PSMD8P48556 350 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CAP1Q01518 475 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 DSC2Q02487 901 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 TREML2Q5T2D2 321 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RASSF6Q6ZTQ3 369 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 ZDHHC21Q8IVQ6 265 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 RGL4Q8IZJ4 473 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 ZNF781Q8N8C0 355 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 CIB1Q99828 191 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 SIX2Q9NPC8 291 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MKS1Q9NXB0 559 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 MARK1Q9P0L2 795 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 DEC1Q9P2X7 70 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 COPS7AQ9UBW8 275 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
SPTLC3-201ENST00000399002 FAM159BA6NKW6 160 aa8.23□□□□□ -1.09
SPTLC3-201ENST00000399002 NME6O75414 186 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms