RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TIE1P35590 1138 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SPAM1P38567 509 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 VAMP2P63027 116 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 JAG1P78504 1218 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 THOC5Q13769 683 aaKnown RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 HMBOX1Q6NT76 420 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC24A5Q71RS6 500 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CMIPQ8IY22 773 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 KIAA2013Q8IYS2 634 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TAGAPQ8N103 731 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CYP4Z2PQ8N1L4 340 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TERB1Q8NA31 727 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NKD2Q969F2 451 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM136AQ96C01 138 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 FUBP3Q96I24 572 aaKnown RBP eCLIP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PAFAH2Q99487 392 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 BTBD10Q9BSF8 475 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TWSG1Q9GZX9 223 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 MMP27Q9H306 513 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SEPT9Q9UHD8 586 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 A4D1N5 150 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM150BA6NC51 233 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 J3QW42 95 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NFIBO00712 420 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 AP1G1O43747 822 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 LPXNO60711 386 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TBX10O75333 385 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PDGFAP04085 211 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SOX9P48436 509 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 MAPK10P53779 464 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.371e-7■■■□□ 16.6
TM9SF4-202ENST00000398022 SLC1A5Q15758 541 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NET1Q7Z628 596 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CLNKQ7Z7G1 428 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 GPR149Q86SP6 731 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 IL31RAQ8NI17 732 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 OR1E3Q8WZA6 343 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 UTP4Q969X6 686 aaKnown RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 DMRTB1Q96MA1 342 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PRDM9Q9NQV7 894 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM184CQ9NVA4 438 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SMPD3Q9NY59 655 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 RBAKQ9NYW8 714 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CLCA2Q9UQC9 943 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PLLPQ9Y342 182 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 CSNK1G3Q9Y6M4 447 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 A0A1W2PRV1 198 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 TYROBPO43914 113 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ESRRBO95718 433 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 HMGCRP04035 888 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 LIPFP07098 398 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 OR4E1P0C645 316 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ADRA1DP25100 572 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 RYKP34925 604 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PTPN7P35236 360 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PUM1Q14671 1186 aaKnown RBP eCLIP6.5□□□□□ -1.371e-6■□□□□ 8.1
TM9SF4-202ENST00000398022 UGCGQ16739 394 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF829Q3KNS6 432 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 C6orf10Q5SRN2 563 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PRAMEF20Q5VT98 475 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ERMP1Q7Z2K6 904 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PAGE2Q7Z2X7 111 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NAGSQ8N159 534 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 LPAR1Q92633 364 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 MCRS1Q96EZ8 462 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 PDLIM5Q96HC4 596 aaKnown RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 MCEEQ96PE7 176 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 RACGAP1Q9H0H5 632 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 POLR3FQ9H1D9 316 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 MAGEE1Q9HCI5 957 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 HEY2Q9UBP5 337 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NKX1-2Q9UD57 310 aaPredicted RBP6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SNX13Q9Y5W8 968 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 SPACA6W5XKT8 324 aa6.5□□□□□ -1.37
TM9SF4-202ENST00000398022 NFASCO94856 1347 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 HTRA2O43464 458 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 GMDSO60547 372 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 UGDHO60701 494 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ENTPD5O75356 428 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 OR7A10O76100 309 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CALCAP01258 141 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZSCAN5DPP0CG00 497 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MPSTP25325 297 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RPS12P25398 132 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 GJA5P36382 358 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CDKN1BP46527 198 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CTXN3Q4LDR2 81 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLX4IPQ5VYV7 408 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RAET1GQ6H3X3 334 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 KLHDC10Q6PID8 442 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 OR4D10Q8NGI6 311 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 BTN2A2Q8WVV5 523 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC7A6OSQ96CW6 309 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TEKT5Q96M29 485 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms