RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ANKHQ9HCJ1 492 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 RGS20O76081 388 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TGFB1P01137 390 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 OLFML2AQ68BL7 652 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 OR4E2Q8NGC2 313 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 SLC22A17Q8WUG5 538 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 PRDM8Q9NQV8 689 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 MT-ND1P03886 318 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 FAM13CQ8NE31 585 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 BPIFB1Q8TDL5 484 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 CPT1BQ92523 772 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 XPNPEP1Q9NQW7 623 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 MFHAS1Q9Y4C4 1052 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 C8GP07360 202 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 PPIBP23284 216 aaKnown RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 SLC7A1P30825 629 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 ABRAXAS1Q6UWZ7 409 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TMEM126BQ8IUX1 230 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 PCBD2Q9H0N5 130 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 CDC7O00311 574 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 ALOX15BO15296 676 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TYRP1P17643 537 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 ACTR3P61158 418 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TIMM50Q3ZCQ8 353 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 NET1Q7Z628 596 aaPredicted RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 TMEM150CB9EJG8 249 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 PLOD3O60568 738 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 KLF8O95600 359 aaPredicted RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 ADGRF1Q5T601 910 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TCEAL6Q6IPX3 200 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 DSN1Q9H410 356 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 METTL18O95568 372 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 TMPRSS9Q7Z410 1059 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 SLC22A15Q8IZD6 547 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ARHGAP39Q9C0H5 1083 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 INTS10Q9NVR2 710 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 LDB2O43679 373 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 CRHR1P34998 444 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 SLC1A2P43004 574 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 FUBP3Q96I24 572 aaKnown RBP eCLIP11.18□□□□□ -0.62
TTC28-201ENST00000397906 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 CLCC1Q96S66 551 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 KLRF1Q9NZS2 232 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 MYOM1P52179 1685 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 UBAP2Q5T6F2 1119 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 INSL5Q9Y5Q6 135 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PDPK1O15530 556 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 FABP3P05413 133 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ADSSP30520 456 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PLGRKTQ9HBL7 147 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ASNA1O43681 348 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 CCR10P46092 362 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 BTN3A2P78410 334 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 COLEC12Q5KU26 742 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 LYSMD3Q7Z3D4 306 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 NAXEQ8NCW5 288 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 NKD1Q969G9 470 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 RIIAD1A6NNX1 92 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 CLDN7O95471 211 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 CFHP08603 1231 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 GANABQ14697 944 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 GKN2Q86XP6 184 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 hCG_2039718K7EN88 272 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TAC3Q9UHF0 121 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 DNM1LO00429 736 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 WFS1O76024 890 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 NOL4O94818 638 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 INMTO95050 263 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PTGER3P43115 390 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PTGES3Q15185 160 aaKnown RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 BROXQ5VW32 411 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 FBXL22Q6P050 247 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 IQCHQ86VS3 1027 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PIK3C3Q8NEB9 887 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PNPLA8Q9NP80 782 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ADAP2Q9NPF8 381 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PIGVQ9NUD9 493 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 KCNK6Q9Y257 313 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 UROSP10746 265 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 STAT5AP42229 794 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 BDKRB1P46663 353 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 CCR8P51685 355 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 GDF10P55107 478 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms