RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TAPBPO15533 448 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TRMUO75648 421 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RSL1D1O76021 490 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SLC5A2P31639 672 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 HNF1BP35680 557 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DGKQP52824 942 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 AP1S1P61966 158 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CYP4F8P98187 520 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 IRAK1BP1Q5VVH5 260 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZFAND4Q86XD8 727 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PPM1MQ96MI6 270 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ABCG8Q9H221 673 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DOLKQ9UPQ8 538 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 POLR3HQ9Y535 204 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CROCCQ5TZA2 2017 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MICAL3Q7RTP6 2002 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RNF103-CHMP3A0A140T963 221 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FFAR3O14843 346 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GPR42O15529 346 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NDUFB5O43674 189 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 H6PDO95479 791 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TRBC1P01850 177 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CXCL10P02778 98 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 S100BP04271 92 aaPredicted RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MRPL19P49406 292 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CREB5Q02930 508 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RELAQ04206 551 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 AP5B1Q2VPB7 878 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TFAP2CQ92754 450 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SEPHS2Q99611 448 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 EGFL8Q99944 293 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RBM38Q9H0Z9 239 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SMOXQ9NWM0 555 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TCRBV5S2A0A599 114 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RAD51BO15315 384 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 BNIP3LO60238 219 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 BPIP17213 487 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TRAF3Q13114 568 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 THOC7Q6I9Y2 204 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CYP20A1Q6UW02 462 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 Q6ZNB5 142 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MILR1Q7Z6M3 343 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TSPAN33Q86UF1 283 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZSWIM9Q86XI8 627 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RBFAQ8N0V3 343 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TRPV3Q8NET8 790 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CCT7Q99832 543 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 C2orf49Q9BVC5 232 aaPredicted RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ANKRD60Q9BZ19 345 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RPF2Q9H7B2 306 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TLR9Q9NR96 1032 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TNPO3Q9Y5L0 923 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 INSL5Q9Y5Q6 135 aa18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 HEMK1Q9Y5R4 338 aaPredicted RBP18.03■□□□□ 0.48
CHRFAM7A-202ENST00000397827 HMOX2P30519 316 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RXRGP48443 463 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CCT8P50990 548 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 EPHB3P54753 998 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NR1H2P55055 460 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 OR4D2P58180 307 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MTPNP58546 118 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SELPLGQ14242 412 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DEFB115Q30KQ5 88 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SNX20Q7Z614 316 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PTRH1Q86Y79 214 aaKnown RBP18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GIPC3Q8TF64 312 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 IL21Q9HBE4 155 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FARSBQ9NSD9 589 aaKnown RBP18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GNPTGQ9UJJ9 305 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DMTF1Q9Y222 760 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GFRA2O00451 464 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CDH15P55291 814 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CHRNA6Q15825 494 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RETSATQ6NUM9 610 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MBOAT1Q6ZNC8 495 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CENPNQ96H22 339 aaPredicted RBP18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DEFB118Q96PH6 123 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CRLS1Q9UJA2 301 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MYRFQ9Y2G1 1151 aa18.02■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 H3BNH8 94 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 H3BSA7 217 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CLIC3O95833 236 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OTCP00480 354 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ITGALP20701 1170 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HRH2P25021 359 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PPP3CCP48454 512 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 INTS11Q5TA45 600 aaKnown RBP18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 BBS7Q8IWZ6 715 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ADGRG2Q8IZP9 1017 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TRIML2Q8N7C3 387 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PDPRQ8NCN5 879 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RMND5BQ96G75 393 aaPredicted RBP18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FAM126AQ9BYI3 521 aaPredicted RBP18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HEBP1Q9NRV9 189 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PNPLA3Q9NST1 481 aa18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PTBP2Q9UKA9 531 aaKnown RBP18.02■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GLYATL1P3A0A0U1RQE8 302 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CKMP06732 381 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms