RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 GLIS1Q8NBF1 620 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 SPATA22Q8NHS9 363 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CPLX3Q8WVH0 158 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CTNNBL1Q8WYA6 563 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF501Q96CX3 271 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 OLFM3Q96PB7 478 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 RUFY1Q96T51 708 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 NLNQ9BYT8 704 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A7Q9HAW7 530 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A10Q9HAW8 530 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A8Q9HAW9 530 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 SLAMF7Q9NQ25 335 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 HACD3Q9P035 362 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 IL17CQ9P0M4 197 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 FAM153AQ9UHL3 310 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 NENFQ9UMX5 172 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 SPO11Q9Y5K1 396 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 A0A0A6YYK5 440 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 LRRD1A4D1F6 860 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 FAM181BA6NEQ2 426 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 MGAT4DA6NG13 374 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 WIPF3A6NGB9 483 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 C3orf70A6NLC5 250 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 APOL1O14791 398 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 SEMA7AO75326 666 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 PMPCBO75439 489 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 MT-CYBP00156 380 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 SLC4A1P02730 911 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 PYGMP11217 842 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 MTHFD1P11586 935 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 HNRNPH3P31942 346 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 SPAM1P38567 509 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 ARHGAP25P42331 645 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 NR2C2P49116 596 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CTSCP53634 463 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 RPS18P62269 152 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 ADCY2Q08462 1091 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CHAF1BQ13112 559 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 GPS2Q13227 327 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 XRCC4Q13426 336 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 IL10RAQ13651 578 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 IQCB1Q15051 598 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 GPR19Q15760 415 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 PPP2R5EQ16537 467 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 LONRF2Q1L5Z9 754 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 EIF2S3LQ2VIR3 472 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 PLEKHS1Q5SXH7 462 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 LRRC38Q5VT99 294 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CPZQ66K79 652 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CERS6Q6ZMG9 384 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 OOSP2Q86WS3 158 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 DSELQ8IZU8 1212 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 TTC30BQ8N4P2 665 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 SLC38A9Q8NBW4 561 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 DDHD1Q8NEL9 900 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CPT1BQ92523 772 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 PNPLA2Q96AD5 504 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 CHST8Q9H2A9 424 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 KIR3DX1Q9H7L2 352 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 IMP3Q9NV31 184 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 C5AR2Q9P296 337 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 TCFL5Q9UL49 500 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 BTRCQ9Y297 605 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 COLEC10Q9Y6Z7 277 aa8.53□□□□□ -1.04
CAPN3-208ENST00000397204 TEP1Q99973 2627 aaKnown RBP8.53□□□□□ -1.04
CAPN3-208ENST00000397204 GLYATL1P3A0A0U1RQE8 302 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 OR6C74A6NCV1 312 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 TCP11X1B4DZS4 312 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 MATN2O00339 956 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF185O15231 689 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 KLHL41O60662 606 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 TMEM63AO94886 807 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 CAPN1P07384 714 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 MSL3P1P0C860 447 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 MSH3P20585 1137 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 NDUFS1P28331 727 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 VAV2P52735 878 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 RRADP55042 308 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 WNT3AP56704 352 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 UBASH3AP57075 661 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 TPM4P67936 248 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 FANCCQ00597 558 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 PRKAA1Q13131 559 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 NFE2L1Q14494 772 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 MESDQ14696 234 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SLC18A3Q16572 532 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 ODF2Q5BJF6 829 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SIRPB2Q5JXA9 342 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms