RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 JUNP05412 331 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 ALPPL2P10696 532 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ALADP13716 330 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 AKR1A1P14550 325 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 PTENP60484 403 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ELF3P78545 371 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 ATAT1Q5SQI0 421 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 KANK2Q63ZY3 851 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 FAM183BPQ6ZVS7 135 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 TM9SF2Q99805 663 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 TBL1XR1Q9BZK7 514 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CCRL2O00421 344 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 AIREO43918 545 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 BCKDHAP12694 445 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CPA6Q8N4T0 437 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 MREGQ8N565 214 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 BEND7Q8N7W2 519 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 ACOT12Q8WYK0 555 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 WNT8BQ93098 351 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 RFKQ969G6 155 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 MRPL57Q9BQC6 102 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 FADS3Q9Y5Q0 445 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 TEX13CA0A0J9YWL9 993 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 FGF10O15520 208 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 CLN5O75503 358 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 SFTPBP07988 381 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 IDO1P14902 403 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 PRLRP16471 622 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 HK1P19367 917 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CPT1BQ92523 772 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMU1-201ENST00000397149 LRTM1Q9HBL6 345 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ZNF451Q9Y4E5 1061 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 A0A1B0GVT2 93 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 UNC5CO95185 931 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ANGPTL1O95841 491 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 SLC35G6P0C7Q6 338 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 SLC3A1Q07837 685 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 LRRC73Q5JTD7 316 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 GPR157Q5UAW9 335 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 BARD1Q99728 777 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 SEMA6BQ9H3T3 888 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ZNF705EA8MWA4 302 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 MPPED1O15442 326 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 IFNW1P05000 195 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 S100PP25815 95 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 FAM13CQ8NE31 585 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 REPS2Q8NFH8 660 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 NANSQ9NR45 359 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 SMIM30A4D0T7 59 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 TGFB3P10600 412 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 ZNF8P17098 575 aaPredicted RBP12.18□□□□□ -0.46
SMU1-201ENST00000397149 CAP2P40123 477 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 LINGO4Q6UY18 593 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 C7orf61Q8IZ16 206 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 PEX13Q92968 403 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 MYO19Q96H55 970 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 SPATC1LQ9H0A9 340 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 SAR1AQ9NR31 198 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 MFHAS1Q9Y4C4 1052 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 WDR62O43379 1518 aa12.18□□□□□ -0.46
SMU1-201ENST00000397149 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 FAM205AQ6ZU69 1335 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 CLDN25C9JDP6 229 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 GZMAP12544 262 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 KDELR1P24390 212 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 SELENOVP59797 346 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 TARDBPQ13148 414 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMU1-201ENST00000397149 RBM48Q5RL73 367 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 LDB1Q86U70 411 aaPredicted RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 KIF18BQ86Y91 864 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 TMEM156Q8N614 296 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 YIPF7Q8N8F6 280 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 CCDC107Q8WV48 283 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 TMED9Q9BVK6 235 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 CLCA3PQ9Y6N3 262 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 H3BQF6 201 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 RAD51DO75771 328 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 LCKP06239 509 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 ZNF35P13682 527 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 GOT1P17174 413 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 RPL5P46777 297 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 DHPSP49366 369 aaPredicted RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 LIPMQ5VYY2 423 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 HM13Q8TCT9 377 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 TSPAN18Q96SJ8 248 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms