RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GSTA1P08263 222 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 OR56A5P0C7T3 313 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 SLC35E2BP0CK96 405 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 CHN1P15882 459 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 MAT2AP31153 395 aaKnown RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 SKIV2L2P42285 1042 aaKnown RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 RXRGP48443 463 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 NXPH1P58417 271 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 TMEM259Q4ZIN3 620 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 CTSL3PQ5NE16 218 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 PNCKQ6P2M8 343 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 MACC1Q6ZN28 852 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 LCA5Q86VQ0 697 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 CLDN19Q8N6F1 224 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 KCNJ9Q92806 393 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 KLK6Q92876 244 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 FAM136AQ96C01 138 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 ZCCHC2Q9C0B9 1178 aaKnown RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 AASDHPPTQ9NRN7 309 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 TRMT6Q9UJA5 497 aaKnown RBP13.02□□□□□ -0.32
SEC13-209ENST00000397117 GRID1Q9ULK0 1009 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 TLR4O00206 839 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.33
SEC13-209ENST00000397117 NIPSNAP2O75323 286 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 COL6A2P12110 1019 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 PGGT1BP53609 377 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 IRF9Q00978 393 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 ILKQ13418 452 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 MPP2Q14168 576 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 INSCQ1MX18 579 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 WSCD2Q2TBF2 565 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 HHATQ5VTY9 493 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 ADAMTSL4Q6UY14 1074 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 DET1Q7L5Y6 550 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 PIM3Q86V86 326 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 SPATS2Q86XZ4 545 aaKnown RBP13.02□□□□□ -0.33
SEC13-209ENST00000397117 DYDC1Q8WWB3 177 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 FGF11Q92914 225 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 HIC2Q96JB3 615 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 PANX3Q96QZ0 392 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 GPR21Q99679 349 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
SEC13-209ENST00000397117 TSSK1BQ9BXA7 367 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 SYTL2Q9HCH5 934 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 SARS2Q9NP81 518 aaKnown RBP13.02□□□□□ -0.33
SEC13-209ENST00000397117 PLLPQ9Y342 182 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 PRSS21Q9Y6M0 314 aa13.02□□□□□ -0.33
SEC13-209ENST00000397117 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 MGAQ8IWI9 3026 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 QSOX1O00391 747 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 LATO43561 262 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 DNAJC6O75061 913 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 MTX2O75431 263 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 AP2A2O94973 939 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 SOD1P00441 154 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 CCDC166P0CW27 439 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 CD9P21926 228 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 SLC26A3P40879 764 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 ARRB1P49407 418 aaPredicted RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 CSRP3P50461 194 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 PPP2CBP62714 309 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 PPP2CAP67775 309 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 B4GALNT1Q00973 533 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 FGL2Q14314 439 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 IRF4Q15306 451 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 FAM83EQ2M2I3 478 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 TSNAXIP1Q2TAA8 658 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 KLC3Q6P597 504 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 KYAT3Q6YP21 454 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 TRIM69Q86WT6 500 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 PELI3Q8N2H9 469 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 ZNF843Q8N446 348 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 MFSD2AQ8NA29 543 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 PLA2G15Q8NCC3 412 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 ASB12Q8WXK4 309 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 LENG8Q96PV6 779 aaPredicted RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 FAM111AQ96PZ2 611 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 CNOT6Q9ULM6 557 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 RUVBL2Q9Y230 463 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 OAS3Q9Y6K5 1087 aaKnown RBP13.01□□□□□ -0.33
SEC13-209ENST00000397117 TENM4Q6N022 2769 aa13.01□□□□□ -0.33
SEC13-209ENST00000397117 TRPM6Q9BX84 2022 aa13□□□□□ -0.33
SEC13-209ENST00000397117 IQCF5A8MTL0 148 aa13□□□□□ -0.33
SEC13-209ENST00000397117 SLC31A1O15431 190 aa13□□□□□ -0.33
SEC13-209ENST00000397117 MAGEC1O60732 1142 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms