RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SMYD2Q9NRG4 433 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 POT1Q9NUX5 634 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 IMP3Q9NV31 184 aaKnown RBP18.77■□□□□ 0.6
HOXA9-202ENST00000396345 NINJ2Q9NZG7 142 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 MED19A0JLT2 244 aaPredicted RBP18.76■□□□□ 0.59
HOXA9-202ENST00000396345 FAM159BA6NKW6 160 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ZW10O43264 779 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 GPC4O75487 556 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ALDH4A1P30038 563 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ABCG1P45844 678 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 OR1D5P58170 312 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 CCL7P80098 99 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 NR1D2Q14995 579 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 SLMAPQ14BN4 828 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 PLEKHS1Q5SXH7 462 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 SPRED1Q7Z699 444 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 PDZD3Q86UT5 571 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ZNF761Q86XN6 746 aaPredicted RBP18.76■□□□□ 0.59
HOXA9-202ENST00000396345 RBM12BQ8IXT5 1001 aaKnown RBP18.76■□□□□ 0.59
HOXA9-202ENST00000396345 FBF1Q8TES7 1133 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ADAMTS14Q8WXS8 1223 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 NDNQ99608 321 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.76■□□□□ 0.59
HOXA9-202ENST00000396345 CDC42EP4Q9H3Q1 356 aaKnown RBP18.76■□□□□ 0.59
HOXA9-202ENST00000396345 ANKZF1Q9H8Y5 726 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 SLC40A1Q9NP59 571 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 LATS2Q9NRM7 1088 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 GALPQ9UBC7 116 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 CDYLQ9Y232 598 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 HEBP2Q9Y5Z4 205 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 PSAT1Q9Y617 370 aa18.76■□□□□ 0.59
HOXA9-202ENST00000396345 PRAMEF33A0A0G2JMD5 474 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 CXorf49A8MYA2 514 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-202ENST00000396345 B4GAT1O43505 415 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 PIAS1O75925 651 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 SLCO2B1O94956 709 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 PHBP35232 272 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 KRT33BQ14525 404 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 DUS1LQ6P1R4 473 aaKnown RBP18.75■□□□□ 0.59
HOXA9-202ENST00000396345 TMEM26Q6ZUK4 368 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 VRK3Q8IV63 474 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 CTAGE3PQ8IX95 158 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 SLC22A15Q8IZD6 547 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 ZBTB2Q8N680 514 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 EIF1ADQ8N9N8 165 aaKnown RBP18.75■□□□□ 0.59
HOXA9-202ENST00000396345 WDR48Q8TAF3 677 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 TFGQ92734 400 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-202ENST00000396345 KCNJ9Q92806 393 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 LRRN3Q9H3W5 708 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 SYNDIG1Q9H7V2 258 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 UCK1Q9HA47 277 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 KCNK4Q9NYG8 393 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 CORO1CQ9ULV4 474 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-202ENST00000396345 MED16Q9Y2X0 877 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 COLEC10Q9Y6Z7 277 aa18.75■□□□□ 0.59
HOXA9-202ENST00000396345 CACNA1AO00555 2505 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 VPS26AO75436 327 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 C1QAP02745 245 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 RPLP0P05388 317 aaKnown RBP18.74■□□□□ 0.59
HOXA9-202ENST00000396345 FAM153BP0C7A2 387 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 ACADLP28330 430 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 NDUFS1P28331 727 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 TNFRSF8P28908 595 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 CLCN7P51798 805 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 INSM1Q01101 510 aaPredicted RBP18.74■□□□□ 0.59
HOXA9-202ENST00000396345 GPR18Q14330 331 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 KBTBD12Q3ZCT8 623 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 AMZ1Q400G9 498 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 FAM153CQ494X1 144 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 RBM20Q5T481 1227 aaKnown RBP18.74■□□□□ 0.59
HOXA9-202ENST00000396345 RAB44Q7Z6P3 723 aaPredicted RBP18.74■□□□□ 0.59
HOXA9-202ENST00000396345 CHCHD4Q8N4Q1 142 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 GPATCH11Q8N954 259 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 SIDT2Q8NBJ9 832 aaKnown RBP18.74■□□□□ 0.59
HOXA9-202ENST00000396345 FERD3LQ96RJ6 166 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 GPR21Q99679 349 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 TXNDC16Q9P2K2 825 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 KLHL42Q9P2K6 505 aa18.74■□□□□ 0.59
HOXA9-202ENST00000396345 LILRA5A6NI73 299 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 CASC3O15234 703 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 ACSL3O95573 720 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 EPHA4P54764 986 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 TTLL9Q3SXZ7 439 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 UBAP2Q5T6F2 1119 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 UGT3A1Q6NUS8 523 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 ZC3HC1Q86WB0 502 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 GSPT2Q8IYD1 628 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 PPM1NQ8N819 430 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 PHC3Q8NDX5 983 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 ZFPM2Q8WW38 1151 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 UBXN4Q92575 508 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 INPP5DQ92835 1189 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 ATXN7L3BQ96GX2 97 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 GFM1Q96RP9 751 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 SLC30A3Q99726 388 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 CPNE1Q99829 537 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 TBC1D10AQ9BXI6 508 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 MVB12BQ9H7P6 319 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 TAS2R13Q9NYV9 303 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms