RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 DIAPH3Q9NSV4 1193 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 ELOVL2Q9NXB9 296 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 FBXL12Q9NXK8 326 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 BARHL2Q9NY43 387 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 CPNE7Q9UBL6 633 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 LRWD1Q9UFC0 647 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 TMCC3Q9ULS5 477 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 FZD4Q9ULV1 537 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 PCDHA12Q9UN75 941 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 TNFSF13BQ9Y275 285 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 MYOFQ9NZM1 2061 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
AP3S1-202ENST00000395548 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PLXNA2O75051 1894 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TRGV11A0A075B6L2 103 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 A0A0G2JK05 382 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TARSL2A2RTX5 802 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 AQP12BA6NM10 295 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PRAMEF26H0Y7S4 382 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 LATO43561 262 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 DPM1O60762 260 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 URI1O94763 535 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 REC8O95072 547 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 OAS1P00973 400 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 KRT19P08727 400 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 ETV5P41161 510 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 ZNF131P52739 623 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PMS2P54278 862 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 LILRA4P59901 499 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 NKX6-1P78426 367 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PPP2R2BQ00005 443 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 ERV3-1Q14264 604 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PRR30Q53SZ7 412 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 DNAJC21Q5F1R6 531 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PARS2Q7L3T8 475 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 KRT74Q7RTS7 529 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 IQCKQ8N0W5 287 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 C3orf20Q8ND61 904 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 CCDC112Q8NEF3 446 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 MCPH1Q8NEM0 835 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 CCDC12Q8WUD4 166 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 STARD8Q92502 1023 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 RILPL2Q969X0 211 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TMX3Q96JJ7 454 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 IL12RB2Q99665 862 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 OMDQ99983 421 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 LXNQ9BS40 222 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 CIPCQ9C0C6 399 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PAIP1Q9H074 479 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PABPC3Q9H361 631 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 LMBRD1Q9NUN5 540 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D29Q9UFV1 150 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 TUBGCP4Q9UGJ1 667 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 FEZ2Q9UHY8 353 aaPredicted RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 UBQLN1Q9UMX0 589 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PLA2G4CQ9UP65 541 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 PCDHA13Q9Y5I0 950 aa5.43□□□□□ -1.54
AP3S1-202ENST00000395548 ZNF106Q9H2Y7 1883 aaKnown RBP5.43□□□□□ -1.54
AP3S1-202ENST00000395548 MSI1O43347 362 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 THAP12O43422 761 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SGTAO43765 313 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 PEX1O43933 1283 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 RAD1O60671 282 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 HSPA4LO95757 839 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 F9P00740 461 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 MCF2P10911 925 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CHMP24386 653 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CYP2F1P24903 491 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ATP6V1E1P36543 226 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 RABIFP47224 123 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CDK18Q07002 472 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 GEN1Q17RS7 908 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 Q4G0T1 1027 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CFAP221Q4G0U5 840 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 DENND5BQ6ZUT9 1274 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 B4GALNT4Q76KP1 1039 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ANKS1BQ7Z6G8 1248 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 LCA5Q86VQ0 697 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SCN4BQ8IWT1 228 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CEP57L1Q8IYX8 460 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ADGRF2Q8IZF7 708 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SH2D3CQ8N5H7 860 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ST6GALNAC3Q8NDV1 305 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 STT3BQ8TCJ2 826 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 BICD2Q8TD16 824 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ACTRT2Q8TDY3 377 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 STYXQ8WUJ0 223 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ST8SIA4Q92187 359 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 PNPLA2Q96AD5 504 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SH3KBP1Q96B97 665 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SNRNP40Q96DI7 357 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 P2RY11Q96G91 374 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms