RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RAD51Q06609 339 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 DDR2Q16832 855 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 AHSA2Q719I0 299 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 OR10T2Q8NGX3 314 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 LINGO1Q96FE5 620 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 PGAP3Q96FM1 320 aaPredicted RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 SPON2Q9BUD6 331 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 APOL5Q9BWW9 433 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 WDR12Q9GZL7 423 aaKnown RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 FAM92AA1XBS5 289 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 TRIM64BA6NI03 449 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 PGLSO95336 258 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 DNTTP04053 509 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 ITGB1P05556 798 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 MYL3P08590 195 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 CLK1P49759 484 aaKnown RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 ISL1P61371 349 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 ABRAXAS2Q15018 415 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 CCL14Q16627 93 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 SPANXN4Q5MJ08 99 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 PAPD5Q8NDF8 572 aaKnown RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 AARSD1Q9BTE6 412 aaKnown RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 OSBPL10Q9BXB5 764 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 YTHDF1Q9BYJ9 559 aaKnown RBP14.09□□□□□ -0.15
CLIP2-203ENST00000395060 TAS2R13Q9NYV9 303 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 ZNF639Q9UID6 485 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 PCTPQ9UKL6 214 aa14.09□□□□□ -0.15
CLIP2-203ENST00000395060 FAM234BA2RU67 622 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.08□□□□□ -0.15
CLIP2-203ENST00000395060 RECQL5O94762 991 aaPredicted RBP14.08□□□□□ -0.15
CLIP2-203ENST00000395060 LRATO95237 230 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 CHRNA1P02708 482 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 THP07101 528 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 C7P10643 843 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 KCNE1P15382 129 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 CDK5R2Q13319 367 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 TUBA3CQ13748 450 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 DGUOKQ16854 277 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ZRANB3Q5FWF4 1079 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 Q6ZPB1 254 aaPredicted RBP14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ZFAND4Q86XD8 727 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 CCDC103Q8IW40 242 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ASPSCR1Q9BZE9 553 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ABHD16BQ9H3Z7 469 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 ACTL8Q9H568 366 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 MRM3Q9HC36 420 aaKnown RBP14.08□□□□□ -0.15
CLIP2-203ENST00000395060 PCDHB14Q9Y5E9 798 aa14.08□□□□□ -0.15
CLIP2-203ENST00000395060 DOCK3Q8IZD9 2030 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SNPHO15079 494 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 GPR182O15218 404 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 KERAO60938 352 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 PEX11BO96011 259 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
CLIP2-203ENST00000395060 UROSP10746 265 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 ALOX12P18054 663 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 LHX1P48742 406 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 FAM189BP81408 668 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 ZNF235Q14590 738 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 TAS2R42Q7RTR8 314 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SPATA19Q7Z5L4 167 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 PLEKHH3Q7Z736 793 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 GPSM1Q86YR5 675 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 PIANPQ8IYJ0 282 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MFSD4AQ8N468 514 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MCFD2Q8NI22 146 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 NETO1Q8TDF5 533 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLIP2-203ENST00000395060 IGSF8Q969P0 613 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 CCDC97Q96F63 343 aaPredicted RBP14.08□□□□□ -0.16
CLIP2-203ENST00000395060 RTP3Q9BQQ7 232 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 TMED5Q9Y3A6 229 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SPO11Q9Y5K1 396 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 NOX1Q9Y5S8 564 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 LRRC37A2A6NM11 1700 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 E5RI56 91 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 CXCR6O00574 342 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 GGT1P19440 569 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 PCMT1P22061 227 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 DCTP40126 519 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MASP1P48740 699 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 ARPP19P56211 112 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 RAB15P59190 212 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 FOXM1Q08050 763 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 TP53BP2Q13625 1128 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SLC14A2Q15849 920 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 SETMARQ53H47 684 aaPredicted RBP14.08□□□□□ -0.16
CLIP2-203ENST00000395060 FRA10AC1Q70Z53 315 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 EID3Q8N140 333 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 KIAA1191Q96A73 305 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 PYCR2Q96C36 320 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MYEOVQ96EZ4 313 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 TPK1Q9H3S4 243 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MAGEE1Q9HCI5 957 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 INTS6Q9UL03 887 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms