RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 RGRP47804 291 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 KRTAP12-3P60328 96 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 PPIAP62937 165 aaKnown RBP0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 EFNB1P98172 346 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 Q1RN00 199 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 TTC31Q49AM3 519 aaPredicted RBP0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 CTXN3Q4LDR2 81 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 MARC1Q5VT66 337 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 KLC3Q6P597 504 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 ZNF527Q8NB42 609 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 C11orf65Q8NCR3 313 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 MYRIPQ8NFW9 859 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 PHF10Q8WUB8 498 aaKnown RBP0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 RUBCNQ92622 972 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 SGF29Q96ES7 293 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 TMEM41AQ96HV5 264 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 CCDC138Q96M89 665 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 NECTIN4Q96NY8 510 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 FNBP1Q96RU3 617 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 LMF2Q9BU23 707 aaKnown RBP0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 SIL1Q9H173 461 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 SEMA6AQ9H2E6 1030 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 C20orf141Q9NUB4 165 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 MIOSQ9NXC5 875 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 TCEAL9Q9UHQ7 104 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 AAR2Q9Y312 384 aaKnown RBP0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 DERAQ9Y315 318 aa0.85□□□□□ -2.27
PCNPP3-201ENST00000393579 A0A1W2PQ72 361 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 A0A1W2PR80 420 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FAM90A7PA6NKC0 464 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FAM90A22PA8MWA6 464 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FAM90A12PA8MX19 464 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FAM90A23PA8MXZ1 464 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ZBTB43O43298 467 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 PIGNO95427 931 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 TIGD6Q17RP2 521 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 MS4A18Q3C1V0 323 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 C6orf141Q5SZD1 244 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 TXNDC8Q6A555 127 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FRRS1Q6ZNA5 592 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 SERINC5Q86VE9 423 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ZNF547Q8IVP9 402 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 C17orf53Q8N3J3 647 aaPredicted RBP0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 PLD5Q8N7P1 536 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 L3MBTL4Q8NA19 623 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 USP38Q8NB14 1042 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 OR1J2Q8NGS2 313 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 TTC8Q8TAM2 541 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 NOC3LQ8WTT2 800 aaKnown RBP0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 FAM104AQ969W3 186 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 HARBI1Q96MB7 349 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ATF6BQ99941 703 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 BRINP2Q9C0B6 783 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ACKR4Q9NPB9 350 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 THAP10Q9P2Z0 257 aaPredicted RBP0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ZNF69Q9UC07 566 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 EID1Q9Y6B2 187 aa0.84□□□□□ -2.27
PCNPP3-201ENST00000393579 ZNFX1Q9P2E3 1918 aaKnown RBP0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 hCG_2014768A0A024R1R8 64 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 SPRR5A0A1B0GTR4 108 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 E9PAM4 449 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 PRKRAO75569 313 aaKnown RBP0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 GCNT3O95395 438 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 ASNSP08243 561 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 PDHA2P29803 388 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 LINC00315P59091 139 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 HERV-K104P61576 105 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 PRKCZQ05513 592 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 MTF1Q14872 753 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 COL28A1Q2UY09 1125 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 USP41Q3LFD5 358 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 KLHL26Q53HC5 615 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 TFDP3Q5H9I0 405 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 TMEM81Q6P7N7 255 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 ZFAND4Q86XD8 727 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 CATSPERDQ86XM0 798 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 KIRREL3Q8IZU9 778 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 Q8N9L7 120 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 RUFY2Q8WXA3 655 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 STAMQ92783 540 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 STARD4Q96DR4 205 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 H2AFJQ9BTM1 129 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 KRT84Q9NSB2 600 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 RPS6KB2Q9UBS0 482 aa0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 RRP7AQ9Y3A4 280 aaKnown RBP0.83□□□□□ -2.28
PCNPP3-201ENST00000393579 SHISA7A6NL88 538 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 SNAP23O00161 211 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 ACKR2O00590 384 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 APAF1O14727 1248 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 ACP2P11117 423 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 GNAQP50148 359 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 ABCE1P61221 599 aaKnown RBP0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 GUCY2DQ02846 1103 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 CKAP4Q07065 602 aaKnown RBP0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 PRKAA1Q13131 559 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 OS9Q13438 667 aaPredicted RBP0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 CUL4BQ13620 913 aa0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 DRAP1Q14919 205 aaPredicted RBP0.82□□□□□ -2.28
PCNPP3-201ENST00000393579 RAB6CQ53S08 254 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms