RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ARF5P84085 180 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 CYP4F3Q08477 520 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 PTGR1Q14914 329 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 TTC23Q5W5X9 447 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 NCEH1Q6PIU2 408 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 R3HCC1LQ7Z5L2 792 aaKnown RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 ZC3H7AQ8IWR0 971 aaKnown RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 PJA1Q8NG27 643 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 HDAC2Q92769 488 aaKnown RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 CCDC97Q96F63 343 aaPredicted RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 FAM210AQ96ND0 272 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 OSBPL10Q9BXB5 764 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 LHPPQ9H008 270 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 IKZF5Q9H5V7 419 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 NSUN3Q9H649 340 aaKnown RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 SMURF2Q9HAU4 748 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 CHCHD3Q9NX63 227 aaKnown RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 ELOVL2Q9NXB9 296 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 PCDHB1Q9Y5F3 818 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 GSTA4O15217 222 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 RAD51BO15315 384 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 TAPBPO15533 448 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 TFPTP0C1Z6 253 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 IL7RP16871 459 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 MSH3P20585 1137 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 HSPA7P48741 367 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 ZNF157P51786 506 aaPredicted RBP18.51■□□□□ 0.55
CBX1-202ENST00000393408 C21orf59P57076 290 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 SKIV2LQ15477 1246 aaKnown RBP18.51■□□□□ 0.55
CBX1-202ENST00000393408 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 OR10A6Q8NH74 314 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 SDCCAG3Q96C92 435 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 EID2BQ96D98 161 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 PLEKHA8Q96JA3 519 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 ZBTB18Q99592 522 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 FEM1AQ9BSK4 669 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 ADNPQ9H2P0 1102 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 LIMD1Q9UGP4 676 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 ADGRE2Q9UHX3 823 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 ZNF510Q9Y2H8 683 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 PCDHGA8Q9Y5G5 932 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 GLUD1P00367 558 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 GSTM2P28161 218 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 PPP2R2BQ00005 443 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 RNF219Q5W0B1 726 aaPredicted RBP18.51■□□□□ 0.55
CBX1-202ENST00000393408 LINGO4Q6UY18 593 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 FKBP9P1Q75LS8 142 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 GALNT13Q8IUC8 556 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 MSRB3Q8IXL7 192 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 SGCDQ92629 289 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 NRBF2Q96F24 287 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 AMBRA1Q9C0C7 1298 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 NACA2Q9H009 215 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 MARCH5Q9NX47 278 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 USE1Q9NZ43 259 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.51■□□□□ 0.55
CBX1-202ENST00000393408 EIF3LQ9Y262 564 aaKnown RBP18.51■□□□□ 0.55
CBX1-202ENST00000393408 PKP3Q9Y446 797 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 SLC30A1Q9Y6M5 507 aa18.51■□□□□ 0.55
CBX1-202ENST00000393408 A0A1B0GVM2 712 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 PRAMEF12O95522 483 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CST1P01037 141 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 AKT1P31749 480 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 FAM174BQ3ZCQ3 159 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 GTF2IRD2BQ6EKJ0 949 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CXorf57Q6NSI4 855 aaKnown RBP18.5■□□□□ 0.55
CBX1-202ENST00000393408 GTF2IRD2Q86UP8 949 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 SPARTQ8N0X7 666 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CARNMT1Q8N4J0 409 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CHDHQ8NE62 594 aaPredicted RBP18.5■□□□□ 0.55
CBX1-202ENST00000393408 PDZD8Q8NEN9 1154 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 RAB2BQ8WUD1 216 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 SLC47A1Q96FL8 570 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 THUMPD3Q9BV44 507 aaKnown RBP18.5■□□□□ 0.55
CBX1-202ENST00000393408 ARHGAP39Q9C0H5 1083 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 GPN2Q9H9Y4 310 aaPredicted RBP18.5■□□□□ 0.55
CBX1-202ENST00000393408 LTB4R2Q9NPC1 389 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 SLC25A37Q9NYZ2 338 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 ZNF711Q9Y462 761 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 RGS14O43566 566 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 BMXP51813 675 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 RAB15P59190 212 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 SMARCB1Q12824 385 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 EPS8Q12929 822 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CRHR2Q13324 411 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 MAPKAPK3Q16644 382 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 SVOPLQ8N434 492 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 BPIFB6Q8NFQ5 453 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 OR52E4Q8NGH9 312 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 CIPCQ9C0C6 399 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 LHX3Q9UBR4 397 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 UTS2RQ9UKP6 389 aa18.5■□□□□ 0.55
CBX1-202ENST00000393408 GOLGA8CPA6NN73 597 aa18.49■□□□□ 0.55
CBX1-202ENST00000393408 CBFA2T3O75081 653 aa18.49■□□□□ 0.55
CBX1-202ENST00000393408 GUCA1CO95843 209 aa18.49■□□□□ 0.55
CBX1-202ENST00000393408 CST5P28325 142 aaPredicted RBP18.49■□□□□ 0.55
CBX1-202ENST00000393408 CCND3P30281 292 aaPredicted RBP18.49■□□□□ 0.55
CBX1-202ENST00000393408 CORO1AP31146 461 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms