RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 VPS37BQ9H9H4 285 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CPNE5Q9HCH3 593 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 IMP3Q9NV31 184 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 BFARQ9NZS9 450 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 MARCH4Q9P2E8 410 aaPredicted RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR5K3A6NET4 321 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 PHF2O75151 1096 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 TMEM63AO94886 807 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLC35G4P0C7Q5 338 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 MLNP12872 115 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 MGAT1P26572 445 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 NDUFS1P28331 727 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 NMBRP28336 390 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 MAGEA3P43357 314 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 FNTAP49354 379 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 PRAMEP78395 509 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 GPS1Q13098 491 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 BOP1Q14137 746 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SOWAHCQ53LP3 525 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 DCAF12Q5T6F0 453 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 PAPD7Q5XG87 772 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 ANKS6Q68DC2 871 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 KLHL35Q6PF15 583 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 GPR155Q7Z3F1 870 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR6P1Q8NGX9 317 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 JPH3Q8WXH2 748 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 NKD1Q969G9 470 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLC41A2Q96JW4 573 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 TEFMQ96QE5 360 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 CCNL2Q96S94 520 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 CARD6Q9BX69 1037 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 APMAPQ9HDC9 416 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SYBUQ9NX95 663 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 FAM8A1Q9UBU6 413 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 PILRAQ9UKJ1 303 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 SOX13Q9UN79 622 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 TMEM184BQ9Y519 407 aaPredicted RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 COLEC10Q9Y6Z7 277 aa11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 HELZ2Q9BYK8 2649 aaKnown RBP11.1□□□□□ -0.63
IGHV4-28-201ENST00000390612 IGHV5-51A0A0C4DH38 117 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TEX51A0A1B0GUA7 166 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 STMND1H3BQB6 276 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CD3EAPO15446 510 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 AVILO75366 819 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 GPC4O75487 556 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 FTH1P02794 183 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR56A5P0C7T3 313 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 PREPP48147 710 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 VPS41P49754 854 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 SRSF6Q13247 344 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 FASTKD1Q53R41 847 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CEACAM20Q6UY09 585 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 FAM129CQ86XR2 697 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CREG2Q8IUH2 290 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CARFQ8N187 725 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 MPP5Q8N3R9 675 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 NAT8LQ8N9F0 302 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 ACVR1CQ8NER5 493 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 UBXN4Q92575 508 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TFGQ92734 400 aaPredicted RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CD180Q99467 661 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TTC1Q99614 292 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 P2RY12Q9H244 342 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TFB2MQ9H5Q4 396 aaKnown RBP11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 MVB12BQ9H7P6 319 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CATSPERZQ9NTU4 200 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 PCYOX1Q9UHG3 505 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 CDYLQ9Y232 598 aa11.09□□□□□ -0.63
IGHV4-28-201ENST00000390612 TLCD2A6NGC4 264 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 PRMT5O14744 637 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 FANCGO15287 622 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 DLGAP3O95886 979 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 TPBGLP0DKB5 382 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 FGF5P12034 268 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 WT1P19544 449 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 RPS3P23396 243 aaKnown RBP eCLIP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 IVDP26440 423 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 CCR7P32248 378 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 PPARGP37231 505 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms