RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PI15O43692 258 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 GPC4O75487 556 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 EIF3JO75822 258 aaKnown RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TPPPO94811 219 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 GH2P01242 217 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 EDN1P05305 212 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 ACTN1P12814 892 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 GATA1P15976 413 aaPredicted RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TMEM11P17152 192 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 CDH2P19022 906 aaPredicted RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 B3GALT5-AS1P59052 145 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 HNRNPDQ14103 355 aaKnown RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 RRS1Q15050 365 aaKnown RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 CTU2Q2VPK5 515 aaKnown RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 ADALQ6DHV7 355 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 METTL7BQ6UX53 244 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 GALNT5Q7Z7M9 940 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 PDILTQ8N807 584 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 OR1J1Q8NGS3 322 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TDRD7Q8NHU6 1098 aaKnown RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TBC1D16Q8TBP0 767 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 MORC4Q8TE76 937 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 HSD17B8Q92506 261 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TRAF4Q9BUZ4 470 aaPredicted RBP2.89□□□□□ -1.95
TRAV40-201ENST00000390467 ACKR4Q9NPB9 350 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 A4GALTQ9NPC4 353 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 RNF186Q9NXI6 227 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 NPAP1Q9NZP6 1156 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 CMAHPQ9Y471 501 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 LYVE1Q9Y5Y7 322 aa2.89□□□□□ -1.95
TRAV40-201ENST00000390467 TDRD15B5MCY1 1934 aaKnown RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 FRMD3A2A2Y4 597 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 PRR32B1ATL7 298 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 E9PQ18 207 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 TO15178 435 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 NDUFS4O43181 175 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 HS6ST1O60243 411 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 OR2C1O95371 312 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 CLDN1O95832 211 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 GABRB1P18505 474 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 GATA2P23769 480 aaPredicted RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 PSMA4P25789 261 aaKnown RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 CDR2Q01850 454 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 IKQ13123 557 aaPredicted RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 TCTEX1D4Q5JR98 221 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 TCTE1Q5JU00 501 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 GRTP1Q5TC63 336 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 KLHL35Q6PF15 583 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 ZNF554Q86TJ5 538 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 SCYL3Q8IZE3 742 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 DCLK2Q8N568 766 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 CPSF7Q8N684 471 aaKnown RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 OR4C3Q8NH37 302 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 ZNRF4Q8WWF5 429 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 HPSE2Q8WWQ2 592 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 PPM1MQ96MI6 270 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 C7orf26Q96N11 449 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 DACH2Q96NX9 599 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 SRSF8Q9BRL6 282 aaKnown RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 TRIM51Q9BSJ1 452 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 C1QTNF1Q9BXJ1 281 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 SLC26A6Q9BXS9 759 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 ITPAQ9BY32 194 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 FGFBP2Q9BYJ0 223 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 PNMA2Q9UL42 364 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 RIPK3Q9Y572 518 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 PCDHGA5Q9Y5G8 931 aa2.88□□□□□ -1.95
TRAV40-201ENST00000390467 COL5A2P05997 1499 aaPredicted RBP2.88□□□□□ -1.95
TRAV40-201ENST00000390467 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 A0A1W2PRB8 838 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 B4E171 279 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 E9PI62 339 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 RNASEH2AO75792 299 aaKnown RBP2.87□□□□□ -1.95
TRAV40-201ENST00000390467 GPIP06744 558 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 LAMP2P13473 410 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 PON1P27169 355 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 PPARGP37231 505 aaPredicted RBP2.87□□□□□ -1.95
TRAV40-201ENST00000390467 TSPAN7P41732 249 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 SNRPEP62304 92 aaKnown RBP2.87□□□□□ -1.95
TRAV40-201ENST00000390467 PLA2G7Q13093 441 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 DLG2Q15700 870 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 SNX30Q5VWJ9 437 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 DOK6Q6PKX4 331 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 PIGZQ86VD9 579 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 ARID3BQ8IVW6 561 aaPredicted RBP2.87□□□□□ -1.95
TRAV40-201ENST00000390467 WDTC1Q8N5D0 677 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 NAXEQ8NCW5 288 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 ZFAND2BQ8WV99 257 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 FAM81BQ96LP2 452 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 CMTM3Q96MX0 182 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 SYT15Q9BQS2 421 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 SH2D4AQ9H788 454 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 HHATLQ9HCP6 504 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 FLRT3Q9NZU0 649 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 ORC3Q9UBD5 711 aaPredicted RBP2.87□□□□□ -1.95
TRAV40-201ENST00000390467 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 FBXL17Q9UF56 701 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 NENFQ9UMX5 172 aa2.87□□□□□ -1.95
TRAV40-201ENST00000390467 SESN1Q9Y6P5 492 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms