RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TLR1Q15399 786 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 PRAMEF13Q5VWM6 474 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 FCRL6Q6DN72 434 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 TMEM207Q6UWW9 146 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 SPNS3Q6ZMD2 512 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 DET1Q7L5Y6 550 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 PPP1R32Q7Z5V6 425 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 HOOK3Q86VS8 718 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 CARFQ8N187 725 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 ZNF808Q8N4W9 903 aaPredicted RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 RASGEF1AQ8N9B8 481 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 OR2Y1Q8NGV0 311 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 BRSK1Q8TDC3 778 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 SPRTNQ9H040 489 aaPredicted RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 SRMSQ9H3Y6 488 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A7Q9HAW7 530 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A10Q9HAW8 530 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A8Q9HAW9 530 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 SLC6A20Q9NP91 592 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 DHCR7Q9UBM7 475 aaKnown RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 AMACRQ9UHK6 382 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 FBXL4Q9UKA2 621 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 POMT2Q9UKY4 750 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 APCP25054 2843 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 ADGRG4Q8IZF6 3080 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 AGPSO00116 658 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 AURKAO14965 403 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 MT-CYBP00156 380 aaPredicted RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 FTLP02792 175 aaPredicted RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 UMODP07911 640 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CD63P08962 238 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CD48P09326 243 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 FERP16591 822 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CAPN3P20807 821 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 PRDX3P30048 256 aaKnown RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 GJC1P36383 396 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 DMPKQ09013 629 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 GALNT2Q10471 571 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 ASIC2Q16515 512 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 PPP2R5EQ16537 467 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 DEFB110Q30KQ9 67 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 FNBP1LQ5T0N5 605 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 B3GNTL1Q67FW5 361 aaPredicted RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 NCBP2-AS2Q69YL0 99 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CDHR3Q6ZTQ4 885 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 NT5DC3Q86UY8 548 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CEP97Q8IW35 865 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 MMP21Q8N119 569 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 NAT14Q8WUY8 206 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CHTF18Q8WVB6 975 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 THOC3Q96J01 351 aaKnown RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 VPS35Q96QK1 796 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 FERD3LQ96RJ6 166 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 NRTNQ99748 197 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 SLX1AQ9BQ83 275 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CEP41Q9BYV8 373 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 ZCCHC2Q9C0B9 1178 aaKnown RBP9.34□□□□□ -0.91
IFT88-203ENST00000389373 KIR3DX1Q9H7L2 352 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 CDC23Q9UJX2 597 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 NEU2Q9Y3R4 380 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 COLEC10Q9Y6Z7 277 aa9.34□□□□□ -0.91
IFT88-203ENST00000389373 MED13LQ71F56 2210 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 C19orf84I3L1E1 186 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 KCNK1O00180 336 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 PCDH17O14917 1159 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 KCNN4O15554 427 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 GPR39O43194 453 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 OR2B3O76000 313 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 UNC5CO95185 931 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 SLC35G4P0C7Q5 338 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 MSH3P20585 1137 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 ALAS2P22557 587 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 NDUFS1P28331 727 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 AKT1P31749 480 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 PBX1P40424 430 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 UBXN1Q04323 297 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 TLE4Q04727 773 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 METRNLQ641Q3 311 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 XKRXQ6PP77 449 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 IGFL2Q6UWQ7 119 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 RPTNQ6XPR3 784 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
IFT88-203ENST00000389373 ZFPM2Q8WW38 1151 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 LCN9Q8WX39 176 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 HDAC11Q96DB2 347 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 TSGA13Q96PP4 275 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 AP1M1Q9BXS5 423 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms