RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 RDH14Q9HBH5 336 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
HMGN1-202ENST00000380747 EPB41L5Q9HCM4 733 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 TREX1Q9NSU2 369 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 MARCH4Q9P2E8 410 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF624Q9P2J8 865 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 SOX13Q9UN79 622 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 WDR37Q9Y2I8 494 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ENTPD2Q9Y5L3 495 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 MAD1L1Q9Y6D9 718 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 PRSS21Q9Y6M0 314 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ARID1BQ8NFD5 2236 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-202ENST00000380747 MYLKQ15746 1914 aa9.05□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF106Q9H2Y7 1883 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 UBR5O95071 2799 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 IGLV3-16A0A075B6K0 115 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 KLHL33A6NCF5 533 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 J3QKU1 62 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CD3EAPO15446 510 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 TLX3O43711 291 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 OR1I1O60431 355 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 URI1O94763 535 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 AP2A2O94973 939 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CPNE6O95741 557 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 MPOP05164 745 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 SLC35G4P0C7Q5 338 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 ITGB6P18564 788 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PAMP19021 973 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CD1CP29017 333 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PPARGP37231 505 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PDX1P52945 283 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 INHBCP55103 352 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 MRPS25P82663 173 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 NR1D2Q14995 579 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CLCA4Q14CN2 919 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 RPE65Q16518 533 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 AARS2Q5JTZ9 985 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 DUS1LQ6P1R4 473 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF449Q6P9G9 518 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PACS1Q6VY07 963 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CERS6Q6ZMG9 384 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 GPR155Q7Z3F1 870 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 B3GNT8Q7Z7M8 397 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 PIM3Q86V86 326 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 LILRA3Q8N6C8 439 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 ZNF669Q96BR6 464 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 LINC00615Q96LM1 132 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 NUDT22Q9BRQ3 303 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 TBC1D10AQ9BXI6 508 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 POT1Q9NUX5 634 aa9.04□□□□□ -0.96
HMGN1-202ENST00000380747 IMP3Q9NV31 184 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CFAP20Q9Y6A4 193 aaKnown RBP9.04□□□□□ -0.96
HMGN1-202ENST00000380747 CCDC187A0A096LP49 1063 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 PRAMEF33A0A0G2JMD5 474 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 MAGEB16A2A368 324 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 CYSRT1A8MQ03 144 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 EFCAB8A8MWE9 144 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 GOLGA8KD6RF30 607 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 F8W8V4 182 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 GOLGA8TH3BQL2 631 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 TMX2-CTNND1H3BSU7 103 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 QSOX1O00391 747 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 DUX1O43812 170 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 PRMT3O60678 531 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 NDUFS3O75489 264 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 FTH1P02794 183 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 OR56A5P0C7T3 313 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 MTHFD1P11586 935 aaKnown RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 MPSTP25325 297 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 PREPP48147 710 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 TTPAP49638 278 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 ITGA8P53708 1063 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 GABREP78334 506 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 CFHR1Q03591 330 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 CBLBQ13191 982 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 THOC5Q13769 683 aaKnown RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 KRT33BQ14525 404 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SYTL3Q4VX76 610 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 DNAJC21Q5F1R6 531 aaKnown RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 C3orf38Q5JPI3 329 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SNAP47Q5SQN1 464 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms