RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ERN2Q76MJ5 926 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 DSG4Q86SJ6 1040 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 EFCAB3Q8N7B9 438 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 METTL6Q8TCB7 284 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 UBTD2Q8WUN7 234 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 NPAS2Q99743 824 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 SLC12A9Q9BXP2 914 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 DCLRE1BQ9H816 532 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 PARVBQ9HBI1 364 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ARL15Q9NXU5 204 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 BRWD1Q9NSI6 2320 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 TMEM202A6NGA9 273 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 QSOX1O00391 747 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 KATNA1O75449 491 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 PDE5AO76074 875 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 SORBS2O94875 1100 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 OTCP00480 354 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 APODP05090 189 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C8GP07360 202 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 CAPN1P07384 714 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C6P13671 934 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 PSMD8P48556 350 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 TRAF3Q13114 568 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 TRMT5Q32P41 509 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 XKR7Q5GH72 579 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C6orf163Q5TEZ5 329 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C1orf146Q5VVC0 180 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C16orf89Q6UX73 402 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ENDOVQ8N8Q3 282 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 OR9I1Q8NGQ6 314 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ASZ1Q8WWH4 475 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ABHD8Q96I13 439 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 CNOT6Q9ULM6 557 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ANGPTL3Q9Y5C1 460 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 UNC80Q8N2C7 3258 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 C1QTNF3-AMACRE9PGA6 284 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 ARNTLO00327 626 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 SOD1P00441 154 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 LMNAP02545 664 aaKnown RBP19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 PRR35P0CG20 571 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 GPX3P22352 226 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 WASP42768 502 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 SOX9P48436 509 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 CCNG1P51959 295 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 STX1BP61266 288 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 ART3Q13508 389 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 E2F5Q15329 346 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 MAPRE2Q15555 327 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 KIF19Q2TAC6 998 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 PREPLQ4J6C6 727 aaPredicted RBP19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 CDKL4Q5MAI5 379 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 PAOXQ6QHF9 649 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 MILR1Q7Z6M3 343 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 OR2T11Q8NH01 316 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 NUS1Q96E22 293 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 TRIM54Q9BYV2 358 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 PFDN4Q9NQP4 134 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 FAM8A1Q9UBU6 413 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 STON1Q9Y6Q2 735 aa19.45■□□□□ 0.7
PDLIM5-205ENST00000380180 GFYI3L273 518 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 K7EPI3 171 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 K7ESM1 405 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 TSPAN6O43657 245 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 LZTS3O60299 673 aaPredicted RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 ENO2P09104 434 aaPredicted RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 P2RY2P41231 377 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 ACADVLP49748 655 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 STX5Q13190 355 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 TMEM52BQ4KMG9 183 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 METTL2BQ6P1Q9 378 aaKnown RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 NUDT18Q6ZVK8 323 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 FBXW8Q8N3Y1 598 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 RIPOR3Q96MK2 946 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 MRPL1Q9BYD6 325 aaKnown RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 ATG13O75143 517 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 STK16O75716 305 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 SLCO2B1O94956 709 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 SNRPB2P08579 225 aaKnown RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HIST1H2AGP0C0S8 130 aaPredicted RBP19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HIST1H2ADP20671 130 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 ACTR3P61158 418 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 CNTN1Q12860 1018 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 OGFOD2Q6N063 350 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 TMEM220Q6QAJ8 160 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 NEK10Q6ZWH5 1172 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HPS6Q86YV9 775 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 FUNDC1Q8IVP5 155 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 CFAP61Q8NHU2 1237 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HIST1H2AHQ96KK5 128 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 CCT7Q99832 543 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HIST1H2AJQ99878 128 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 H2AFJQ9BTM1 129 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 HDAC8Q9BY41 377 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 CLDND1Q9NY35 253 aa19.44■□□□□ 0.7
PDLIM5-205ENST00000380180 FBP2O00757 339 aa19.43■□□□□ 0.7
PDLIM5-205ENST00000380180 KRT36O76013 467 aa19.43■□□□□ 0.7
PDLIM5-205ENST00000380180 PSMG1O95456 288 aa19.43■□□□□ 0.7
PDLIM5-205ENST00000380180 PRLHRP49683 370 aa19.43■□□□□ 0.7
PDLIM5-205ENST00000380180 GALK1P51570 392 aa19.43■□□□□ 0.7
PDLIM5-205ENST00000380180 MTTPP55157 894 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms