RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 C1orf220Q5T0J3 134 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 TIGD3Q6B0B8 471 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 SPESP1Q6UW49 350 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 TFAP2EQ6VUC0 442 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 ZNF782Q6ZMW2 699 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 XXYLT1Q8NBI6 393 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 CEP76Q8TAP6 659 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 HMGCLL1Q8TB92 370 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 ARL5BQ96KC2 179 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 ZBTB18Q99592 522 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 GAL3ST1Q99999 423 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 ACE2Q9BYF1 805 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 SHARPINQ9H0F6 387 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 LHX5Q9H2C1 402 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 LDAHQ9H6V9 325 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 ACOT13Q9NPJ3 140 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 KMT5AQ9NQR1 393 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 GSN-AS1Q9NRJ2 163 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 LIPT1Q9Y234 373 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 CLCA3PQ9Y6N3 262 aa8.39□□□□□ -1.07
NHLRC3-201ENST00000379599 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 TMEM191CA6NGB0 347 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 LGALS8O00214 317 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FZD6O60353 706 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ATP6AP2O75787 350 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 RAF1P04049 648 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CYP11A1P05108 521 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ACSM4P0C7M7 580 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ERVK-10P10266 1014 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CYP4B1P13584 511 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PRKACGP22612 351 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 GYG1P46976 350 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CLCN7P51798 805 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ISL1P61371 349 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 OGDHQ02218 1023 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 VPS26BQ4G0F5 336 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PAN3Q58A45 887 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ZNF484Q5JVG2 852 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 LRRC38Q5VT99 294 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM92BQ6ZTR7 304 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 BTN2A1Q7KYR7 527 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 NLGN4YQ8NFZ3 816 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FRS2Q8WU20 508 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 MYDGFQ969H8 173 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 SIGLEC10Q96LC7 697 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 NUSAP1Q9BXS6 441 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 C11orf54Q9H0W9 315 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 IL1RAPQ9NPH3 570 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 DYRK4Q9NR20 520 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 OXSMQ9NWU1 459 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 MBD2Q9UBB5 411 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 GLS2Q9UI32 602 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ADAM30Q9UKF2 790 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ING4Q9UNL4 249 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PCDHGA2Q9Y5H1 932 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ADGRA2Q96PE1 1338 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CLDN24A6NM45 220 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 INPPL1O15357 1258 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FABP7O15540 132 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 WBP4O75554 376 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PAPSS2O95340 614 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ALPPP05187 535 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 S100A9P06702 114 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PSMA2P25787 234 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 HLA-DMAP28067 261 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CD6P30203 668 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 SSTR2P30874 369 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 MTHFRP42898 656 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 POU4F1Q01851 419 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CNTN2Q02246 1040 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 RELQ04864 619 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 TSC22D1Q15714 1073 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 C4orf46Q504U0 113 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CLLU1Q5K131 121 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 NOL9Q5SY16 702 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 BHLHB9Q6PI77 547 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CCDC149Q6ZUS6 474 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 AHSA2Q719I0 299 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CCDC190Q86UF4 302 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 FBXL13Q8NEE6 735 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 GANCQ8TET4 914 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 MBOAT4Q96T53 435 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ITPAQ9BY32 194 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 RIBC2Q9H4K1 309 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ZDHHC4Q9NPG8 344 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 PAK6Q9NQU5 681 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ZNF275Q9NSD4 429 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 C1orf112Q9NSG2 853 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 CMTM6Q9NX76 183 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 NAALAD2Q9Y3Q0 740 aa8.38□□□□□ -1.07
NHLRC3-201ENST00000379599 ASB14A6NK59 587 aa8.37□□□□□ -1.07
NHLRC3-201ENST00000379599 TEX46H3BTG2 121 aa8.37□□□□□ -1.07
NHLRC3-201ENST00000379599 BCKDKO14874 412 aa8.37□□□□□ -1.07
NHLRC3-201ENST00000379599 MYL12BO14950 172 aa8.37□□□□□ -1.07
NHLRC3-201ENST00000379599 SNAPINO95295 136 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms